Os06g0126400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0126400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 423.61 | 0.967 | 6.32 | 0.124 | 0.768 | 1.36 | 0.308 | 3.43 | -0.522 | 12.2 | 68.93 | 5091 | -- | -- |
| 439.06 | 0.976 | 6.31 | 0.032 | 0.749 | 1.56 | 0.154 | -- | -0.503 | 12.1 | 67.99 | 5088 | -- | -- |
| 423.99 | 0.959 | 6.32 | 0.133 | 0.765 | 1.35 | -- | 3.39 | -0.521 | 12.3 | 68.86 | 5087 | -- | -- |
| 438.79 | 0.976 | 6.3 | 0.0544 | 0.753 | 1.55 | -- | -- | -0.449 | 12.1 | 67 | 5067 | -- | -- |
| 455.54 | 0.994 | 6.34 | 0.131 | -- | 1.25 | -- | 3.15 | -0.576 | -- | 69.93 | 4669 | -- | -- |
| 475.64 | 1.02 | 6.3 | -0.00232 | 0.679 | -- | -0.0892 | -- | -0.476 | 13.1 | -- | -- | -- | -- |
| 475.67 | 1.02 | 6.3 | -0.00564 | 0.678 | -- | -- | -- | -0.477 | 13 | -- | -- | -- | -- |
| 466.5 | 1.01 | 6.3 | 0.0107 | -- | 1.46 | -- | -- | -0.426 | -- | 67.97 | 4691 | -- | -- |
| 438.86 | 0.976 | 6.29 | -- | 0.753 | 1.54 | -- | -- | -0.444 | 12.1 | 67.08 | 5067 | -- | -- |
| 504.27 | 1.05 | 6.31 | -0.0313 | -- | -- | -- | -- | -0.49 | -- | -- | -- | -- | -- |
| 475.67 | 1.02 | 6.3 | -- | 0.679 | -- | -- | -- | -0.476 | 13 | -- | -- | -- | -- |
| 466.5 | 1.01 | 6.3 | -- | -- | 1.47 | -- | -- | -0.427 | -- | 67.79 | 4685 | -- | -- |
| 504.3 | 1.05 | 6.31 | -- | -- | -- | -- | -- | -0.487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 407.49 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 2 | 408.91 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 4 | 411.23 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 5 | 412.17 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 13 | 414.95 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 16 | 415.69 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 19 | 416.13 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 32 | 417.48 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 37 | 417.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 40 | 418.01 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 5 |
| 42 | 418.07 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 43 | 418.08 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 61 | 418.48 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 16 |
| 63 | 418.63 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 69 | 418.79 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 79 | 419.08 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 85 | 419.18 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 5 | 8 |
| 86 | 419.18 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 24 | 13 |
| 114 | 419.83 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 132 | 420.15 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 147 | 420.48 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 10 |
| 205 | 420.85 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 215 | 420.95 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 238 | 421.43 | humidity | 70.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 263 | 421.71 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 296 | 422.07 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 307 | 422.13 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 316 | 422.17 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 359 | 422.44 | humidity | 70.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 408 | 422.73 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 410 | 422.77 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 412 | 422.78 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 450 | 422.95 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 480 | 423.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 517 | 423.35 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 526 | 423.39 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 556 | 423.53 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 607 | 423.76 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 663 | 423.97 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 876 | 424.87 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 915 | 425.05 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 925 | 425.08 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 930 | 425.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 938 | 425.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 939 | 425.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 969 | 425.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 980 | 425.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 981 | 425.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |