Os06g0125200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF581 family protein.
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Os06g0125200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF581 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 585.42 | 1.14 | 9.57 | 1.23 | 6.12 | 4.82 | -2.2 | -7.72 | 0.273 | 20.8 | 20.8 | 762 | 4.44 | -- |
| 695.56 | 1.23 | 9.38 | 2.91 | 5.92 | 4.59 | -1.7 | -- | 0.675 | 21.4 | 20.91 | 843 | 3.91 | -- |
| 595.07 | 1.14 | 9.56 | 1.36 | 5.93 | 4.81 | -- | -6.72 | 0.243 | 20.7 | 20.91 | 818 | 5.09 | -- |
| 692.99 | 1.23 | 9.43 | 2.83 | 6.07 | 4.75 | -- | -- | 0.563 | 21.5 | 20.9 | 809 | 3.41 | -- |
| 1324.77 | 1.7 | 9.83 | -1.18 | -- | 5.48 | -- | -9.17 | 0.00654 | -- | 20.06 | 3468 | 10.8 | -- |
| 1288.33 | 1.68 | 9.08 | 4.11 | 3.79 | -- | -2.1 | -- | 1.69 | 22 | -- | -- | -- | -- |
| 1305.3 | 1.69 | 9.08 | 4.19 | 3.8 | -- | -- | -- | 1.7 | 21.9 | -- | -- | -- | -- |
| 1082.48 | 1.53 | 9.4 | 0.362 | -- | 8.68 | -- | -- | 0.14 | -- | 19.3 | 3422 | 11.5 | -- |
| 879.28 | 1.38 | 9.46 | -- | 5.91 | 5.33 | -- | -- | 0.164 | 21.4 | 20.7 | 947 | 4.5 | -- |
| 2171.88 | 2.18 | 8.98 | 4.24 | -- | -- | -- | -- | 1.7 | -- | -- | -- | -- | -- |
| 1768.7 | 1.97 | 9.19 | -- | 3.82 | -- | -- | -- | 1.23 | 22 | -- | -- | -- | -- |
| 1051.24 | 1.51 | 9.3 | -- | -- | 9.72 | -- | -- | 0.268 | -- | 19.39 | 3494 | 12.6 | -- |
| 2645.09 | 2.4 | 9.09 | -- | -- | -- | -- | -- | 1.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 657.75 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 3 | 661.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 15 |
| 6 | 664.82 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 17 |
| 17 | 669.76 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 19 | 670.75 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 9 |
| 47 | 679.04 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 51 | 679.74 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 54 | 680.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 58 | 681.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 60 | 681.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 68 | 682.21 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 71 | 682.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 94 | 685.26 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 111 | 686.84 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 113 | 686.96 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 14 |
| 140 | 689.06 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 161 | 690.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 186 | 692.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 7 |
| 210 | 694.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 222 | 695.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 404 | 707.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 8 |
| 446 | 710.48 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 17 |
| 681 | 722.31 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 22 |
| 733 | 724.94 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 740 | 725.23 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 908 | 731.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 996 | 734.05 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 22 |