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Os06g0119800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0276) R2 : 0.295
β1 : 0.899 (0.101) R2dD : 0.126 R2D : -0.0075
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.714 (0.059) R2dN8 : 0.303 R2N8 : 0.169
σ : 0.519
deviance : 123.29
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
88.46 0.442 10.5 0.503 0.673 0.665 0.916 2.99 0.688 23.3 25.22 803 -- --
97.5 0.463 10.4 1.02 0.473 0.662 0.146 -- 0.801 22.2 41.42 2517 -- --
90.41 0.443 10.5 0.561 0.584 0.711 -- 2.91 0.699 22.9 23.87 363 -- --
97.49 0.463 10.4 1.02 0.469 0.692 -- -- 0.805 22.1 51.46 5 -- --
101.77 0.47 10.5 0.66 -- 0.917 -- 3.03 0.728 -- 37.44 2 -- --
101.63 0.473 10.5 0.896 0.584 -- 0.305 -- 0.709 23.3 -- -- -- --
102.01 0.473 10.5 0.884 0.583 -- -- -- 0.709 23.2 -- -- -- --
109.45 0.487 10.4 1.08 -- 0.98 -- -- 0.845 -- 47.3 2 -- --
122.21 0.518 10.5 -- 0.554 0.201 -- -- 0.634 23 51.46 5 -- --
123.29 0.519 10.4 0.899 -- -- -- -- 0.714 -- -- -- -- --
122.62 0.518 10.5 -- 0.592 -- -- -- 0.61 23.3 -- -- -- --
138.28 0.548 10.4 -- -- 0.642 -- -- 0.687 -- 66.81 2 -- --
144.59 0.561 10.5 -- -- -- -- -- 0.614 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.50 wind 9 14400 < th dose independent rect. 13 1
2 84.16 wind 3 43200 < th dose dependent rect. 21 4
5 84.57 wind 9 14400 > th dose independent rect. 13 1
8 85.00 humidity 80 14400 < th dose dependent rect. 4 1
12 85.17 wind 9 14400 > th dose dependent rect. 12 2
14 85.35 wind 9 14400 > th dose dependent rect. 10 4
24 85.54 wind 9 14400 > th dose independent rect. 10 4
45 85.77 wind 9 14400 < th dose independent rect. 8 6
46 85.77 wind 9 14400 < th dose independent rect. 6 8
48 85.81 atmosphere 1000 270 < th dose independent rect. 7 17
56 85.99 temperature 25 43200 < th dose independent rect. 20 1
61 86.06 temperature 25 43200 > th dose independent rect. 21 1
76 86.17 wind 9 14400 > th dose dependent rect. 22 16
101 86.28 wind 9 14400 > th dose dependent rect. 24 14
126 86.38 wind 9 14400 < th dose independent rect. 24 14
147 86.45 wind 9 14400 < th dose independent rect. 2 12
151 86.48 humidity 80 14400 < th dose dependent rect. 1 1
156 86.49 wind 9 14400 > th dose independent rect. 24 14
158 86.50 humidity 80 14400 < th dose dependent rect. 21 9
201 86.65 wind 9 14400 > th dose dependent rect. 12 8
215 86.71 wind 9 14400 > th dose independent sin 1 NA
216 86.71 atmosphere 1000 270 < th dose independent sin 21 NA
223 86.73 wind 9 14400 > th dose dependent sin 1 NA
233 86.76 wind 1 43200 < th dose independent rect. 10 2
240 86.78 wind 9 14400 > th dose independent rect. 10 10
249 86.80 wind 7 14400 > th dose dependent rect. 15 1
254 86.82 atmosphere 1005 270 < th dose dependent rect. 7 17
261 86.85 wind 9 14400 > th dose independent rect. 13 7
273 86.88 wind 1 43200 > th dose independent rect. 10 2
287 86.90 atmosphere 1005 90 < th dose dependent rect. 9 16
303 86.94 humidity 90 43200 < th dose dependent rect. 21 1
314 86.98 wind 1 43200 < th dose dependent rect. 10 1
323 87.01 wind 9 14400 > th dose dependent rect. 10 10
352 87.09 wind 9 14400 < th dose independent sin 2 NA
381 87.16 wind 9 14400 < th dose independent rect. 13 7
398 87.19 wind 9 14400 > th dose independent rect. 24 20
404 87.21 humidity 80 43200 > th dose independent rect. 17 7
410 87.22 temperature 30 720 > th dose independent rect. 8 6
430 87.25 temperature 30 720 > th dose independent rect. 17 21
434 87.26 temperature 30 1440 < th dose independent rect. 2 11
439 87.27 temperature 30 1440 < th dose independent rect. 4 9
446 87.28 wind 9 14400 < th dose independent rect. 10 10
451 87.28 atmosphere 1005 10 < th dose dependent rect. 8 18
452 87.29 temperature 30 720 > th dose independent sin 9 NA
455 87.30 wind 1 43200 < th dose independent rect. 9 4
462 87.31 temperature 30 1440 < th dose independent rect. 21 16
477 87.33 wind 1 14400 < th dose dependent rect. 9 5
492 87.35 wind 9 14400 < th dose independent rect. 8 12
506 87.36 wind 9 14400 < th dose independent rect. 6 14
511 87.38 wind 9 14400 > th dose independent rect. 15 1
543 87.44 wind 9 14400 > th dose dependent rect. 22 22
571 87.50 wind 9 14400 > th dose dependent rect. 24 20
591 87.55 temperature 10 270 > th dose dependent rect. 16 23
601 87.59 radiation 1 4320 > th dose independent rect. 17 1
603 87.59 humidity 80 43200 < th dose independent rect. 17 7
610 87.60 wind 9 14400 < th dose independent rect. 24 20
634 87.65 humidity 80 43200 > th dose independent rect. 18 5
661 87.67 wind 9 14400 > th dose dependent rect. 18 22
685 87.71 temperature 30 14400 > th dose dependent rect. 8 1
699 87.72 temperature 30 1440 > th dose independent rect. 12 1
730 87.78 temperature 30 1440 < th dose independent sin 9 NA
737 87.79 humidity 90 720 > th dose dependent rect. 20 4
744 87.81 wind 9 14400 < th dose independent rect. 15 1
747 87.81 humidity 90 720 > th dose dependent rect. 18 6
750 87.82 temperature 30 720 > th dose dependent rect. 8 6
773 87.84 wind 1 43200 < th dose dependent rect. 9 17
785 87.86 radiation 1 4320 < th dose dependent rect. 17 1
796 87.88 wind 9 14400 > th dose independent rect. 19 21
797 87.88 temperature 30 1440 < th dose independent rect. 16 21
804 87.89 temperature 25 43200 > th dose dependent rect. 19 1
813 87.92 temperature 30 1440 < th dose independent rect. 10 1
821 87.93 radiation 1 4320 < th dose independent rect. 17 1
826 87.94 temperature 30 14400 > th dose independent rect. 8 1
838 87.94 humidity 80 14400 < th dose independent rect. 20 11
851 87.96 wind 1 43200 < th dose independent rect. 16 10
855 87.96 humidity 90 720 > th dose dependent rect. 21 2
859 87.97 atmosphere 1000 10 < th dose independent rect. 8 18
864 87.98 temperature 30 14400 < th dose independent rect. 2 7
870 87.98 temperature 30 720 > th dose dependent sin 7 NA
879 87.99 wind 1 43200 < th dose dependent rect. 12 14
902 88.02 humidity 90 43200 < th dose dependent rect. 17 12
922 88.04 atmosphere 1005 10 < th dose dependent rect. 6 20
966 88.07 temperature 25 720 < th dose dependent rect. 2 22
974 88.09 temperature 30 14400 < th dose independent rect. 6 3
985 88.10 humidity 90 43200 < th dose dependent rect. 18 8