Os06g0119300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0119300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF594 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.79 | 0.569 | 7.28 | -1.03 | 0.533 | -1.75 | -0.555 | -0.316 | 0.249 | 6.54 | 0.8709 | 1457 | -- | -- |
| 146.73 | 0.564 | 7.28 | -1.09 | 0.534 | -1.73 | -0.542 | -- | 0.238 | 6.31 | 0.8125 | 1464 | -- | -- |
| 144.61 | 0.56 | 7.27 | -1.03 | 0.733 | -2.11 | -- | -0.548 | 0.258 | 4.14 | 0.5634 | 1559 | -- | -- |
| 144.43 | 0.56 | 7.29 | -1.11 | 0.766 | -2.04 | -- | -- | 0.225 | 4.17 | 0.6034 | 1568 | -- | -- |
| 161.69 | 0.592 | 7.29 | -0.974 | -- | -1.77 | -- | -0.415 | 0.287 | -- | 0.6481 | 1472 | -- | -- |
| 176.53 | 0.623 | 7.24 | -0.655 | 0.562 | -- | -0.596 | -- | 0.458 | 7.08 | -- | -- | -- | -- |
| 177.44 | 0.624 | 7.24 | -0.668 | 0.562 | -- | -- | -- | 0.459 | 6.95 | -- | -- | -- | -- |
| 161.74 | 0.592 | 7.3 | -1.07 | -- | -1.76 | -- | -- | 0.263 | -- | 0.6751 | 1472 | -- | -- |
| 172.06 | 0.611 | 7.25 | -- | 0.797 | -1.61 | -- | -- | 0.408 | 4.14 | 1.02 | 1623 | -- | -- |
| 194.01 | 0.651 | 7.25 | -0.656 | -- | -- | -- | -- | 0.47 | -- | -- | -- | -- | -- |
| 189.19 | 0.643 | 7.22 | -- | 0.554 | -- | -- | -- | 0.534 | 7.03 | -- | -- | -- | -- |
| 187.83 | 0.638 | 7.26 | -- | -- | -1.23 | -- | -- | 0.425 | -- | 1.119 | 1488 | -- | -- |
| 205.36 | 0.669 | 7.23 | -- | -- | -- | -- | -- | 0.543 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 3 | 135.54 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 5 | 135.71 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 10 | 137.40 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 14 | 138.38 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 16 | 138.52 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 30 | 139.73 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 31 | 139.77 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 37 | 140.02 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 38 | 140.04 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 57 | 140.45 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 118 | 141.53 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 119 | 141.54 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 124 | 141.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 134 | 141.67 | wind | 5 | 43200 | < th | dose independent | sin | 18 | NA |
| 159 | 141.97 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 203 | 142.43 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 206 | 142.46 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 236 | 142.67 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 246 | 142.75 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 297 | 143.04 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 317 | 143.13 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 318 | 143.13 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 327 | 143.19 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 389 | 143.49 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 390 | 143.49 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 417 | 143.64 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 425 | 143.68 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 427 | 143.69 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 447 | 143.80 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 476 | 143.96 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 502 | 144.08 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 524 | 144.18 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 530 | 144.19 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 615 | 144.57 | humidity | 50 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 634 | 144.62 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 652 | 144.68 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 677 | 144.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 685 | 144.81 | radiation | 1 | 1440 | < th | dose dependent | sin | 15 | NA |
| 698 | 144.85 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 724 | 144.95 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 739 | 144.99 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 754 | 145.02 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 755 | 145.02 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 756 | 145.03 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 783 | 145.08 | radiation | 30 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 786 | 145.09 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 794 | 145.10 | radiation | 1 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 796 | 145.11 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 823 | 145.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 849 | 145.26 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 908 | 145.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 945 | 145.53 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 955 | 145.53 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 967 | 145.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 982 | 145.56 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 984 | 145.57 | humidity | 50 | 14400 | < th | dose independent | sin | 11 | NA |
| 987 | 145.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 8 |