Os06g0115700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0115700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.52 | 0.688 | 3.73 | -2.85 | 0.337 | 1.51 | -1.86 | -7.69 | -0.204 | 5.74 | 21.94 | 1024 | -- | -- |
| 246.45 | 0.731 | 3.5 | -0.933 | 0.584 | 1.31 | -1.45 | -- | 0.345 | 4.15 | 5.659 | 677 | -- | -- |
| 218.87 | 0.689 | 3.74 | -2.93 | 0.364 | 1.36 | -- | -7.67 | -0.205 | 2.69 | 22.14 | 1139 | -- | -- |
| 252.11 | 0.74 | 3.49 | -0.901 | 0.616 | 1.35 | -- | -- | 0.344 | 4.02 | 8.354 | 643 | -- | -- |
| 226.02 | 0.7 | 3.74 | -2.97 | -- | 1.49 | -- | -7.76 | -0.222 | -- | 22.2 | 1117 | -- | -- |
| 270.13 | 0.771 | 3.45 | -0.602 | 0.52 | -- | -1.17 | -- | 0.541 | 2.7 | -- | -- | -- | -- |
| 274.12 | 0.775 | 3.45 | -0.573 | 0.519 | -- | -- | -- | 0.549 | 1.82 | -- | -- | -- | -- |
| 261.43 | 0.753 | 3.5 | -0.938 | -- | 1.32 | -- | -- | 0.336 | -- | 9.541 | 1054 | -- | -- |
| 270.98 | 0.767 | 3.46 | -- | 0.586 | 0.941 | -- | -- | 0.496 | 3.41 | 5.479 | 580 | -- | -- |
| 290.42 | 0.796 | 3.45 | -0.552 | -- | -- | -- | -- | 0.561 | -- | -- | -- | -- | -- |
| 282.77 | 0.787 | 3.44 | -- | 0.508 | -- | -- | -- | 0.613 | 1.78 | -- | -- | -- | -- |
| 281.5 | 0.781 | 3.46 | -- | -- | 0.825 | -- | -- | 0.492 | -- | 17.5 | 1020 | -- | -- |
| 298.45 | 0.806 | 3.43 | -- | -- | -- | -- | -- | 0.622 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 210.62 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 8 | 212.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 15 | 213.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 31 | 213.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 39 | 213.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 46 | 213.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 49 | 213.77 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 88 | 214.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 19 |
| 100 | 214.93 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 19 |
| 104 | 215.02 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 108 | 215.10 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 112 | 215.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 127 | 215.32 | temperature | 20 | 30 | > th | dose dependent | sin | 12 | NA |
| 132 | 215.37 | humidity | 90 | 43200 | < th | dose independent | sin | 18 | NA |
| 145 | 215.49 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 18 |
| 159 | 215.68 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 14 |
| 162 | 215.72 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 17 |
| 163 | 215.73 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 12 |
| 167 | 215.76 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 21 |
| 179 | 215.83 | humidity | 90 | 43200 | > th | dose independent | rect. | 1 | 18 |
| 185 | 215.84 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 192 | 215.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 206 | 216.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 1 | 22 |
| 218 | 216.16 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 11 |
| 301 | 216.61 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 21 |
| 321 | 216.70 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 22 |
| 347 | 216.82 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 357 | 216.87 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 389 | 217.04 | humidity | 90 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 399 | 217.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 493 | 217.70 | humidity | 90 | 43200 | > th | dose independent | sin | 3 | NA |
| 510 | 217.79 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 17 |
| 535 | 217.90 | humidity | 90 | 43200 | < th | dose independent | sin | 3 | NA |
| 614 | 218.31 | humidity | 90 | 43200 | > th | dose dependent | sin | 2 | NA |
| 664 | 218.58 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 665 | 218.58 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 23 |
| 722 | 218.83 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 744 | 218.92 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 808 | 219.28 | temperature | 25 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 834 | 219.37 | temperature | 25 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 841 | 219.38 | temperature | 20 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 856 | 219.42 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 857 | 219.42 | temperature | 25 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 860 | 219.43 | temperature | 25 | 43200 | > th | dose independent | sin | 15 | NA |
| 882 | 219.47 | temperature | 25 | 43200 | < th | dose independent | sin | 15 | NA |
| 883 | 219.47 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 901 | 219.52 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 922 | 219.57 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 1 |