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Os06g0115400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0267) R2 : 0.586
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.14 (0.0901) R2dE : 0.502 R2E : 0.481
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.513 (0.0563) R2dN8 : 0.105 R2N8 : 0.0841
σ : 0.503
deviance : 116.45
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_____
C
peak time of C : --
E
wheather : temperature
threshold : -8.064
memory length : 316
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.26
open length of G : 19.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.82 0.467 12.1 -0.709 0.854 1.64 -0.75 -0.454 -0.629 19.8 7.245 89 8.13 21.1
98.78 0.463 12.1 -0.67 0.865 1.63 -0.808 -- -0.601 19.7 5.858 95 8.12 21.1
99.64 0.465 12.1 -0.691 0.811 1.66 -- -0.963 -0.604 19.8 4.961 114 8.03 21
99.88 0.465 12 -0.635 0.752 1.7 -- -- -0.585 19.8 3.931 122 8.18 20.8
113.83 0.497 12.1 -0.642 -- 2.23 -- -0.342 -0.605 -- 0.779 150 8.43 20.1
140.83 0.556 12.1 -0.422 1.45 -- -1.06 -- -0.561 18.8 -- -- -- --
143.7 0.561 12.1 -0.404 1.44 -- -- -- -0.564 18.8 -- -- -- --
106.61 0.481 12 -0.649 -- 2.17 -- -- -0.588 -- -4.089 324 7.18 19.4
109.9 0.488 12 -- 0.811 1.53 -- -- -0.539 19.4 1.823 118 8.3 20.7
252.77 0.743 12 -0.437 -- -- -- -- -0.592 -- -- -- -- --
148.01 0.569 12 -- 1.45 -- -- -- -0.519 18.8 -- -- -- --
116.45 0.503 12 -- -- 2.14 -- -- -0.513 -- -8.064 316 7.26 19.4
257.8 0.749 12 -- -- -- -- -- -0.543 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 99.94 temperature 10.0 90 > th dose dependent rect. 8 21
4 104.12 temperature 10.0 10 > th dose dependent rect. 8 22
21 107.65 temperature 30.0 90 < th dose dependent rect. 5 14
22 107.91 wind 9.0 90 < th dose independent rect. 8 21
31 108.80 temperature 20.0 270 > th dose dependent rect. 23 13
32 108.81 temperature 10.0 270 > th dose dependent rect. 23 14
38 109.38 temperature 30.0 90 < th dose independent rect. 5 4
41 109.49 wind 5.0 90 < th dose independent rect. 5 3
43 109.53 precipitation 0.1 90 < th dose independent rect. 8 21
44 109.53 precipitation 0.1 90 < th dose dependent rect. 8 21
49 109.70 temperature 10.0 90 > th dose independent rect. 5 3
52 109.70 humidity 50.0 90 > th dose independent rect. 5 3
54 109.70 atmosphere 995.0 90 > th dose independent rect. 5 3
55 109.70 atmosphere 1015.0 90 < th dose independent rect. 5 3
56 109.70 temperature 10.0 90 > th dose independent rect. 8 21
57 109.71 precipitation 0.1 90 < th dose independent rect. 5 3
58 109.71 precipitation 0.1 90 < th dose dependent rect. 5 3
61 109.78 wind 9.0 270 < th dose independent rect. 6 23
65 109.90 radiation 40.0 90 < th dose independent rect. 5 3
67 109.99 temperature 30.0 90 < th dose dependent rect. 5 6
72 110.15 radiation 1.0 90 > th dose independent rect. 4 4
82 110.16 temperature 30.0 270 < th dose dependent rect. 3 16
97 110.32 wind 1.0 90 > th dose independent rect. 5 3
99 110.39 temperature 10.0 90 > th dose dependent rect. 5 3
100 110.40 temperature 30.0 90 < th dose dependent rect. 5 18
101 110.42 wind 9.0 90 < th dose dependent rect. 5 4
102 110.42 temperature 30.0 90 < th dose dependent rect. 5 16
116 110.92 temperature 30.0 270 < th dose dependent rect. 3 6
125 111.07 temperature 30.0 90 < th dose dependent rect. 5 10
127 111.12 atmosphere 995.0 90 > th dose dependent rect. 5 3
132 111.28 temperature 25.0 270 > th dose independent rect. 23 15
137 111.43 wind 9.0 90 < th dose dependent rect. 9 20
141 111.50 wind 9.0 10 < th dose independent rect. 8 22
156 112.16 atmosphere 995.0 90 > th dose independent rect. 8 21
174 112.35 temperature 10.0 270 > th dose dependent rect. 7 8
182 112.52 temperature 25.0 270 < th dose independent rect. 3 8
197 112.76 temperature 25.0 270 < th dose independent rect. 3 15
200 112.78 precipitation 0.1 10 < th dose independent rect. 8 22
201 112.78 precipitation 0.1 10 < th dose dependent rect. 8 22
203 112.83 temperature 30.0 90 < th dose independent rect. 5 14
205 112.84 wind 5.0 10 < th dose independent rect. 6 2
207 112.85 precipitation 0.1 270 < th dose independent rect. 6 23
208 112.85 precipitation 0.1 270 < th dose dependent rect. 6 23
216 112.97 temperature 10.0 10 > th dose independent rect. 6 2
218 112.97 temperature 30.0 10 < th dose independent rect. 6 2
219 112.97 humidity 50.0 10 > th dose independent rect. 6 2
221 112.97 atmosphere 995.0 10 > th dose independent rect. 6 2
222 112.97 atmosphere 1015.0 10 < th dose independent rect. 6 2
223 112.97 temperature 10.0 10 > th dose independent rect. 8 22
224 113.00 atmosphere 1015.0 90 < th dose independent rect. 8 21
225 113.01 precipitation 0.1 10 < th dose independent rect. 6 2
226 113.01 precipitation 0.1 10 < th dose dependent rect. 6 2
230 113.08 temperature 25.0 270 < th dose independent rect. 3 10
236 113.13 temperature 25.0 270 < th dose independent rect. 3 12
241 113.22 radiation 10.0 30 < th dose dependent sin 10 NA
242 113.22 temperature 30.0 90 < th dose dependent rect. 5 4
256 113.34 wind 5.0 270 < th dose independent rect. 5 1
259 113.36 radiation 1.0 90 > th dose dependent rect. 5 2
282 113.53 wind 1.0 10 > th dose independent rect. 6 2
285 113.56 wind 9.0 10 < th dose dependent rect. 6 2
288 113.61 humidity 50.0 90 > th dose dependent rect. 5 4
292 113.70 precipitation 0.1 270 < th dose independent rect. 5 1
295 113.70 precipitation 0.1 270 < th dose dependent rect. 5 1
299 113.71 temperature 10.0 270 > th dose independent rect. 5 1
301 113.71 temperature 30.0 270 < th dose independent rect. 5 1
302 113.71 humidity 50.0 270 > th dose independent rect. 5 1
305 113.71 atmosphere 995.0 270 > th dose independent rect. 5 1
306 113.71 atmosphere 1015.0 270 < th dose independent rect. 5 1
307 113.71 radiation 20.0 270 < th dose independent rect. 5 1
310 113.71 temperature 10.0 270 > th dose independent rect. 6 23
316 113.77 atmosphere 1000.0 90 > th dose independent rect. 5 18
319 113.85 radiation 40.0 90 < th dose dependent rect. 5 4
340 113.96 radiation 40.0 10 < th dose independent rect. 6 2
342 113.97 temperature 10.0 10 > th dose dependent rect. 6 2
348 114.05 radiation 1.0 10 > th dose independent rect. 6 2
354 114.08 radiation 1.0 90 > th dose independent sin 10 NA
374 114.13 wind 9.0 270 < th dose dependent rect. 5 1
382 114.22 radiation 40.0 270 < th dose dependent rect. 5 1
385 114.27 wind 9.0 1440 < th dose independent rect. 6 3
386 114.27 temperature 10.0 1440 > th dose independent rect. 6 3
389 114.27 humidity 50.0 1440 > th dose independent rect. 6 3
391 114.27 atmosphere 995.0 1440 > th dose independent rect. 6 3
392 114.27 atmosphere 1015.0 1440 < th dose independent rect. 6 3
394 114.27 temperature 10.0 1440 > th dose independent rect. 9 21
401 114.32 atmosphere 995.0 90 > th dose dependent rect. 5 18
405 114.35 temperature 20.0 270 > th dose dependent rect. 7 7
409 114.39 humidity 90.0 90 < th dose independent rect. 5 3
412 114.41 radiation 1.0 90 < th dose independent sin 10 NA
417 114.45 temperature 30.0 90 < th dose independent rect. 5 18
441 114.59 atmosphere 995.0 270 > th dose dependent rect. 5 1
442 114.60 atmosphere 995.0 10 > th dose dependent rect. 6 2
494 114.79 wind 5.0 90 < th dose independent rect. 23 6
507 114.90 temperature 25.0 270 > th dose independent rect. 8 5
509 114.91 wind 1.0 90 > th dose independent rect. 9 20
525 114.97 temperature 20.0 270 > th dose dependent rect. 8 4
543 115.15 temperature 25.0 270 > th dose independent rect. 7 7
545 115.16 temperature 20.0 270 > th dose dependent sin 6 NA
569 115.31 precipitation 0.1 90 < th dose independent rect. 23 6
571 115.31 precipitation 0.1 90 < th dose dependent rect. 23 6
578 115.35 temperature 10.0 90 > th dose dependent rect. 23 6
579 115.36 atmosphere 995.0 10 > th dose independent rect. 8 22
609 115.47 radiation 40.0 90 < th dose independent rect. 5 18
614 115.49 atmosphere 1015.0 90 < th dose dependent rect. 6 1
617 115.50 temperature 30.0 90 < th dose dependent rect. 6 1
626 115.53 wind 9.0 90 < th dose dependent rect. 23 6
663 115.67 radiation 1.0 90 < th dose independent rect. 23 6
671 115.69 radiation 20.0 90 < th dose dependent rect. 23 6
672 115.70 humidity 90.0 10 < th dose independent rect. 6 2
673 115.70 temperature 10.0 90 > th dose independent rect. 23 6
674 115.70 temperature 30.0 90 < th dose independent rect. 23 6
675 115.70 humidity 50.0 90 > th dose independent rect. 23 6
678 115.70 atmosphere 995.0 90 > th dose independent rect. 23 6
682 115.70 temperature 10.0 90 > th dose independent rect. 5 18
714 115.84 humidity 50.0 10 > th dose independent rect. 8 22
794 116.08 humidity 50.0 270 > th dose dependent rect. 5 1
824 116.17 wind 9.0 90 < th dose dependent rect. 19 10
852 116.25 temperature 25.0 270 < th dose independent sin 5 NA
885 116.39 atmosphere 1015.0 90 < th dose independent rect. 5 18
907 116.47 temperature 30.0 90 < th dose dependent sin 1 NA
909 116.48 atmosphere 1015.0 10 < th dose independent rect. 8 22
913 116.49 atmosphere 1015.0 90 < th dose dependent rect. 9 20
928 116.51 humidity 50.0 90 > th dose independent rect. 8 21
947 116.59 precipitation 0.1 90 < th dose independent rect. 5 18
949 116.59 precipitation 0.1 90 < th dose dependent rect. 5 18
961 116.64 humidity 50.0 10 > th dose dependent rect. 6 3