Os06g0115300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl-CoA-binding protein 2 (ACBP 2) (Fragment).
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Os06g0115300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl-CoA-binding protein 2 (ACBP 2) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.99 | 0.517 | 14.1 | 0.0963 | 0.537 | -1.37 | -0.453 | 3.26 | 0.0651 | 14.3 | 25.6 | 4906 | -- | -- |
| 118.56 | 0.507 | 14.1 | -0.622 | 0.511 | -1.09 | -0.283 | -- | 0.271 | 13.5 | 23.3 | 9256 | -- | -- |
| 121.54 | 0.513 | 14.1 | 0.101 | 0.54 | -1.37 | -- | 3.48 | 0.0462 | 13.9 | 25.95 | 4870 | -- | -- |
| 118.75 | 0.508 | 14.1 | -0.564 | 0.506 | -1.11 | -- | -- | 0.288 | 13.5 | 23.1 | 9221 | -- | -- |
| 134.34 | 0.54 | 14.1 | 0.0989 | -- | -1.57 | -- | 3.57 | 0.0866 | -- | 25.18 | 3678 | -- | -- |
| 159.64 | 0.592 | 14.2 | -1.06 | 0.562 | -- | -0.126 | -- | -0.139 | 13.3 | -- | -- | -- | -- |
| 159.7 | 0.592 | 14.2 | -1.07 | 0.561 | -- | -- | -- | -0.14 | 13.2 | -- | -- | -- | -- |
| 132.58 | 0.536 | 14.1 | -0.556 | -- | -1.16 | -- | -- | 0.301 | -- | 23.5 | 9634 | -- | -- |
| 122.88 | 0.516 | 14.1 | -- | 0.513 | -1.37 | -- | -- | 0.4 | 13.1 | 18.47 | 21378 | -- | -- |
| 179.17 | 0.625 | 14.2 | -1.09 | -- | -- | -- | -- | -0.152 | -- | -- | -- | -- | -- |
| 189.73 | 0.644 | 14.2 | -- | 0.579 | -- | -- | -- | -0.0214 | 13.3 | -- | -- | -- | -- |
| 136.41 | 0.544 | 14.1 | -- | -- | -1.45 | -- | -- | 0.435 | -- | 19.58 | 9689 | -- | -- |
| 210.47 | 0.677 | 14.2 | -- | -- | -- | -- | -- | -0.0309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.76 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 3 | 114.98 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 8 | 115.83 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 9 | 115.98 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 13 | 116.21 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 17 | 116.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 63 | 117.81 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 93 | 118.14 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 99 | 118.23 | temperature | 20 | 14400 | > th | dose independent | sin | 15 | NA |
| 115 | 118.40 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 148 | 118.61 | temperature | 20 | 14400 | < th | dose independent | sin | 15 | NA |
| 187 | 118.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 234 | 119.28 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 252 | 119.42 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 258 | 119.44 | radiation | 10 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 277 | 119.53 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 314 | 119.73 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 321 | 119.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 335 | 119.83 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 339 | 119.86 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 348 | 119.89 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 353 | 119.91 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 357 | 119.92 | wind | 7 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 368 | 119.99 | temperature | 25 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 382 | 120.03 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 393 | 120.08 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 418 | 120.16 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 436 | 120.22 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 476 | 120.30 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 517 | 120.40 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 523 | 120.41 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 526 | 120.42 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 577 | 120.55 | temperature | 20 | 14400 | > th | dose independent | rect. | 5 | 22 |
| 587 | 120.58 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 8 |
| 604 | 120.60 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 12 |
| 611 | 120.61 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 640 | 120.68 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 658 | 120.70 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 668 | 120.73 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 669 | 120.73 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 673 | 120.75 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 676 | 120.76 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 689 | 120.79 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 735 | 120.89 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 742 | 120.90 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 779 | 120.97 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 794 | 120.99 | temperature | 20 | 14400 | < th | dose independent | rect. | 5 | 22 |
| 802 | 121.01 | temperature | 25 | 14400 | < th | dose independent | sin | 3 | NA |
| 822 | 121.04 | temperature | 25 | 14400 | > th | dose independent | sin | 4 | NA |
| 845 | 121.09 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 903 | 121.22 | temperature | 25 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 941 | 121.30 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 952 | 121.32 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 985 | 121.37 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 10 |