Os06g0115200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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Os06g0115200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.14 | 0.339 | 8.93 | 1.86 | 1.45 | -0.703 | -0.866 | 1.27 | 0.322 | 18.5 | 24.34 | 1443 | -- | -- |
| 53.03 | 0.339 | 8.95 | 1.61 | 1.47 | -0.616 | -0.868 | -- | 0.288 | 18.4 | 22.48 | 5964 | -- | -- |
| 53.94 | 0.342 | 8.93 | 1.89 | 1.45 | -0.716 | -- | 1.36 | 0.33 | 18.6 | 24.24 | 1414 | -- | -- |
| 54.61 | 0.344 | 8.97 | 1.56 | 1.49 | -0.596 | -- | -- | 0.259 | 18.5 | 22.77 | 6008 | -- | -- |
| 161.03 | 0.591 | 8.89 | 1.91 | -- | -0.829 | -- | 1.4 | 0.335 | -- | 24 | 1351 | -- | -- |
| 66.29 | 0.382 | 9 | 1.28 | 1.47 | -- | -0.854 | -- | 0.132 | 18.4 | -- | -- | -- | -- |
| 68.05 | 0.386 | 9 | 1.29 | 1.47 | -- | -- | -- | 0.129 | 18.5 | -- | -- | -- | -- |
| 162.59 | 0.594 | 8.92 | 1.52 | -- | -0.711 | -- | -- | 0.323 | -- | 24.09 | 1338 | -- | -- |
| 108.14 | 0.484 | 9.04 | -- | 1.44 | -0.26 | -- | -- | -0.0446 | 18.5 | 30.3 | 5794 | -- | -- |
| 180.08 | 0.627 | 8.97 | 1.26 | -- | -- | -- | -- | 0.0984 | -- | -- | -- | -- | -- |
| 112.17 | 0.495 | 9.03 | -- | 1.45 | -- | -- | -- | -0.0151 | 18.5 | -- | -- | -- | -- |
| 214.17 | 0.682 | 9 | -- | -- | -0.353 | -- | -- | -0.0966 | -- | 30.2 | 5779 | -- | -- |
| 221.74 | 0.695 | 9 | -- | -- | -- | -- | -- | -0.0411 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 2 | 50.38 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 11 | 50.91 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 28 | 51.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 30 | 51.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 35 | 51.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 48 | 51.86 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 57 | 51.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 62 | 51.91 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 75 | 51.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 77 | 51.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 166 | 52.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 251 | 52.22 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 268 | 52.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 271 | 52.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 314 | 52.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 332 | 52.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 371 | 52.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 377 | 52.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 389 | 52.76 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 397 | 52.79 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 449 | 52.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 466 | 53.07 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 482 | 53.15 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 558 | 53.35 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 581 | 53.37 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 634 | 53.45 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 734 | 53.53 | temperature | 30 | 14400 | < th | dose independent | sin | 15 | NA |
| 761 | 53.56 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 780 | 53.57 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 894 | 53.66 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 915 | 53.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 16 |
| 929 | 53.69 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 954 | 53.70 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |