Os06g0114000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 60 kDa chaperonin (Protein Cpn60) (groEL protein) (63 kDa stress protein) (GSP63).
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Os06g0114000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 60 kDa chaperonin (Protein Cpn60) (groEL protein) (63 kDa stress protein) (GSP63).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.91 | 0.443 | 14.4 | 0.28 | 1.78 | 1.45 | -0.134 | -1.89 | -0.589 | 19.3 | 25.4 | 10 | -- | -- |
| 90.14 | 0.442 | 14.4 | 0.485 | 1.78 | 1.28 | -0.148 | -- | -0.548 | 19.3 | 25.2 | 7 | -- | -- |
| 88.96 | 0.439 | 14.4 | 0.283 | 1.78 | 1.44 | -- | -1.89 | -0.589 | 19.3 | 25.4 | 9 | -- | -- |
| 90.2 | 0.442 | 14.4 | 0.485 | 1.78 | 1.28 | -- | -- | -0.546 | 19.3 | 25.2 | 7 | -- | -- |
| 199.08 | 0.657 | 14.4 | -0.0547 | -- | 2.29 | -- | -2.41 | -0.775 | -- | 24.3 | 315 | -- | -- |
| 114.55 | 0.502 | 14.4 | 0.679 | 2.03 | -- | 0.236 | -- | -0.454 | 18.4 | -- | -- | -- | -- |
| 114.69 | 0.502 | 14.4 | 0.675 | 2.03 | -- | -- | -- | -0.453 | 18.4 | -- | -- | -- | -- |
| 204.39 | 0.666 | 14.4 | 0.275 | -- | 2.07 | -- | -- | -0.705 | -- | 24.2 | 314 | -- | -- |
| 96.17 | 0.457 | 14.4 | -- | 1.76 | 1.4 | -- | -- | -0.61 | 19.4 | 25.14 | 7 | -- | -- |
| 328.3 | 0.847 | 14.4 | 0.623 | -- | -- | -- | -- | -0.496 | -- | -- | -- | -- | -- |
| 126.71 | 0.527 | 14.4 | -- | 2.02 | -- | -- | -- | -0.528 | 18.4 | -- | -- | -- | -- |
| 206.39 | 0.669 | 14.4 | -- | -- | 2.12 | -- | -- | -0.737 | -- | 24.2 | 314 | -- | -- |
| 338.55 | 0.859 | 14.4 | -- | -- | -- | -- | -- | -0.565 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.58 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 4 |
| 7 | 77.49 | temperature | 25 | 90 | > th | dose dependent | sin | 4 | NA |
| 8 | 77.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 16 | 78.91 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 6 |
| 53 | 80.78 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 14 |
| 55 | 80.80 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 5 |
| 60 | 81.10 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 63 | 81.19 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 13 |
| 100 | 82.42 | temperature | 25 | 270 | > th | dose independent | sin | 3 | NA |
| 104 | 82.48 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 7 |
| 148 | 83.65 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 10 |
| 161 | 83.90 | temperature | 25 | 270 | < th | dose independent | sin | 3 | NA |
| 175 | 84.14 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 10 |
| 182 | 84.24 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 233 | 84.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 243 | 84.72 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 19 |
| 296 | 85.27 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 12 |
| 309 | 85.44 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 323 | 85.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 330 | 85.60 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 360 | 85.87 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 379 | 86.18 | temperature | 25 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 491 | 87.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 13 |
| 603 | 88.43 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 608 | 88.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 665 | 88.91 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 769 | 89.28 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 996 | 90.08 | temperature | 15 | 30 | > th | dose dependent | rect. | 8 | 20 |