Os06g0113500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0113500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.75 | 0.584 | 7.13 | 3.99 | 0.682 | 0.711 | -0.216 | 0.607 | 0.797 | 14.7 | 60.69 | 1385 | -- | -- |
| 155.18 | 0.58 | 7.12 | 4.05 | 0.694 | 0.81 | -0.247 | -- | 0.831 | 14.7 | 65.27 | 1410 | -- | -- |
| 154.91 | 0.58 | 7.13 | 3.98 | 0.682 | 0.724 | -- | 0.598 | 0.799 | 14.7 | 61.78 | 1385 | -- | -- |
| 155.26 | 0.58 | 7.12 | 4.04 | 0.705 | 0.839 | -- | -- | 0.84 | 14.6 | 66.65 | 1414 | -- | -- |
| 174.42 | 0.615 | 7.13 | 3.97 | -- | 1.02 | -- | 0.619 | 0.803 | -- | 61.55 | 1179 | -- | -- |
| 167.02 | 0.606 | 7.14 | 4.04 | 0.74 | -- | -0.0871 | -- | 0.754 | 14.7 | -- | -- | -- | -- |
| 167.05 | 0.605 | 7.14 | 4.04 | 0.74 | -- | -- | -- | 0.754 | 14.7 | -- | -- | -- | -- |
| 174.97 | 0.616 | 7.12 | 4.04 | -- | 1.06 | -- | -- | 0.828 | -- | 62.85 | 1179 | -- | -- |
| 563.45 | 1.11 | 7.16 | -- | 0.627 | 1.33 | -- | -- | 0.677 | 14.6 | 57 | 8592 | -- | -- |
| 198.92 | 0.659 | 7.14 | 4 | -- | -- | -- | -- | 0.735 | -- | -- | -- | -- | -- |
| 596.46 | 1.14 | 7.24 | -- | 0.661 | -- | -- | -- | 0.304 | 14.6 | -- | -- | -- | -- |
| 428.6 | 0.964 | 7.17 | -- | -- | 3.9 | -- | -- | 0.601 | -- | -58.14 | 47520 | -- | -- |
| 622.01 | 1.16 | 7.24 | -- | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.87 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 2 | 148.51 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 3 | 148.61 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 6 | 149.54 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 11 | 149.86 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 18 | 150.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 20 | 150.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 21 | 150.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 40 | 150.45 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 18 | 16 |
| 43 | 150.46 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 22 | 12 |
| 44 | 150.46 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 19 | 15 |
| 45 | 150.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 64 | 150.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 18 |
| 67 | 150.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 18 |
| 68 | 150.54 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 69 | 150.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 18 |
| 71 | 150.55 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 78 | 150.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 82 | 150.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 96 | 150.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 116 | 150.78 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 119 | 150.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 18 |
| 143 | 150.84 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 158 | 150.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 164 | 150.93 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 204 | 151.07 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 214 | 151.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 21 |
| 215 | 151.11 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 218 | 151.12 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 8 |
| 222 | 151.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 227 | 151.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 21 |
| 228 | 151.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 230 | 151.13 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 232 | 151.13 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 233 | 151.13 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 19 | 15 |
| 282 | 151.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 283 | 151.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 287 | 151.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 22 | 23 |
| 291 | 151.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 294 | 151.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 297 | 151.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 22 |
| 299 | 151.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 338 | 151.29 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 12 | NA |
| 342 | 151.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 394 | 151.47 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 395 | 151.47 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 397 | 151.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 398 | 151.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 400 | 151.47 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 402 | 151.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 434 | 151.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 447 | 151.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 454 | 151.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 455 | 151.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 458 | 151.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 473 | 151.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 474 | 151.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 475 | 151.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 477 | 151.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 479 | 151.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 7 |
| 500 | 151.68 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 13 | NA |
| 506 | 151.69 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 13 | NA |
| 507 | 151.69 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 13 | NA |
| 508 | 151.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 510 | 151.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 577 | 151.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 590 | 151.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 600 | 151.86 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 604 | 151.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 606 | 151.87 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 609 | 151.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 615 | 151.89 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 719 | 152.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 760 | 152.17 | radiation | 10.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 781 | 152.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 800 | 152.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 806 | 152.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 828 | 152.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 895 | 152.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 905 | 152.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 910 | 152.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 10 |
| 911 | 152.38 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 947 | 152.43 | radiation | 20.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 967 | 152.48 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 975 | 152.50 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 993 | 152.53 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 6 |