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Os06g0112200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Purine and other phosphorylases, family 1 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0169) R2 : 0.00782
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0675 (0.0356) R2dN8 : 0.0101 R2N8 : 0.00782
σ : 0.318
deviance : 46.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.19 0.226 11.3 -0.428 0.631 0.56 0.361 0.279 -0.081 15.4 0.02104 82 -- --
23.42 0.225 11.3 -0.421 0.63 0.555 0.0877 -- -0.079 15.4 0.02 81 -- --
23.4 0.225 11.3 -0.398 0.627 0.56 -- 0.129 -0.0689 15.3 0.01856 75 -- --
23.44 0.225 11.3 -0.411 0.621 0.553 -- -- -0.0756 15.4 0.02 79 -- --
32.82 0.268 11.3 -0.457 -- 0.267 -- 0.0346 -0.102 -- 1.632e-05 54 -- --
28.15 0.249 11.3 -0.463 0.478 -- 0.118 -- -0.114 20.1 -- -- -- --
28.19 0.249 11.3 -0.466 0.478 -- -- -- -0.114 20.1 -- -- -- --
32.8 0.267 11.3 -0.446 -- 0.272 -- -- -0.112 -- 0.04 13 -- --
28.03 0.247 11.3 -- 0.631 0.556 -- -- -0.0681 15.3 0.01858 71 -- --
40.72 0.298 11.3 -0.47 -- -- -- -- -0.12 -- -- -- -- --
33.91 0.272 11.3 -- 0.481 -- -- -- -0.0619 20 -- -- -- --
38.12 0.288 11.3 -- -- 0.285 -- -- -0.0678 -- 0.01998 16 -- --
46.55 0.318 11.3 -- -- -- -- -- -0.0675 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.01 radiation 1.0 90 < th dose dependent sin 13 NA
3 20.48 humidity 60.0 270 > th dose independent rect. 17 9
4 20.62 humidity 50.0 270 > th dose independent rect. 7 19
5 20.65 radiation 1.0 90 > th dose independent sin 13 NA
6 20.65 humidity 50.0 270 > th dose independent rect. 6 21
7 20.66 radiation 1.0 90 < th dose independent sin 13 NA
11 20.82 radiation 10.0 270 < th dose dependent rect. 16 10
14 20.90 wind 7.0 270 < th dose independent rect. 18 8
18 20.95 temperature 30.0 270 < th dose independent rect. 17 9
21 20.99 wind 9.0 270 < th dose independent rect. 7 19
25 21.01 wind 9.0 270 < th dose independent rect. 6 21
32 21.06 wind 9.0 270 < th dose dependent rect. 3 3
35 21.08 radiation 1.0 270 < th dose dependent rect. 9 17
37 21.09 wind 9.0 270 < th dose dependent rect. 2 5
39 21.10 radiation 1.0 270 < th dose dependent rect. 13 13
45 21.13 radiation 10.0 270 < th dose independent rect. 17 9
46 21.13 radiation 1.0 270 < th dose independent rect. 9 17
51 21.14 radiation 1.0 270 < th dose independent rect. 13 13
52 21.14 humidity 50.0 270 > th dose dependent rect. 2 5
62 21.18 wind 1.0 90 > th dose independent rect. 8 7
66 21.19 wind 9.0 270 < th dose independent rect. 6 8
68 21.20 wind 5.0 270 < th dose independent rect. 2 5
71 21.21 precipitation 0.1 270 < th dose independent rect. 18 8
72 21.21 radiation 30.0 270 < th dose dependent rect. 2 5
74 21.21 precipitation 0.1 270 < th dose dependent rect. 18 8
77 21.22 humidity 50.0 270 > th dose dependent rect. 3 3
78 21.23 wind 5.0 270 < th dose independent rect. 3 3
79 21.24 radiation 1.0 90 > th dose independent rect. 17 14
83 21.25 wind 9.0 270 < th dose independent rect. 7 6
86 21.26 precipitation 0.1 270 < th dose independent rect. 6 8
87 21.26 precipitation 0.1 270 < th dose dependent rect. 6 8
89 21.27 temperature 10.0 270 > th dose independent rect. 2 5
91 21.27 temperature 30.0 270 < th dose independent rect. 2 5
92 21.27 humidity 50.0 270 > th dose independent rect. 2 5
94 21.27 atmosphere 995.0 270 > th dose independent rect. 2 5
95 21.27 atmosphere 1015.0 270 < th dose independent rect. 2 5
96 21.27 radiation 30.0 270 < th dose independent rect. 2 5
100 21.27 temperature 10.0 270 > th dose independent rect. 7 19
102 21.28 precipitation 0.1 270 < th dose independent rect. 7 19
106 21.28 precipitation 0.1 270 < th dose dependent rect. 7 19
109 21.29 precipitation 0.1 270 < th dose independent rect. 2 5
110 21.29 precipitation 0.1 270 < th dose dependent rect. 2 5
112 21.30 radiation 10.0 270 < th dose independent rect. 2 5
118 21.31 temperature 10.0 270 > th dose independent rect. 6 8
119 21.31 atmosphere 995.0 270 > th dose independent rect. 6 8
120 21.31 atmosphere 1015.0 270 < th dose independent rect. 6 8
123 21.31 temperature 10.0 270 > th dose independent rect. 14 16
135 21.32 radiation 1.0 270 > th dose independent rect. 7 6
138 21.32 precipitation 0.1 270 < th dose independent rect. 7 6
142 21.32 precipitation 0.1 270 < th dose dependent rect. 7 6
146 21.33 temperature 10.0 270 > th dose independent rect. 7 6
147 21.33 atmosphere 995.0 270 > th dose independent rect. 7 6
148 21.33 atmosphere 1015.0 270 < th dose independent rect. 7 6
151 21.33 temperature 10.0 270 > th dose independent rect. 13 18
166 21.35 temperature 10.0 270 > th dose independent rect. 3 3
168 21.35 temperature 30.0 270 < th dose independent rect. 3 3
169 21.35 humidity 50.0 270 > th dose independent rect. 3 3
172 21.35 atmosphere 995.0 270 > th dose independent rect. 3 3
173 21.35 atmosphere 1015.0 270 < th dose independent rect. 3 3
174 21.35 radiation 20.0 270 < th dose independent rect. 3 3
182 21.35 temperature 10.0 270 > th dose independent rect. 6 21
187 21.36 temperature 10.0 270 > th dose independent rect. 18 8
192 21.36 temperature 10.0 270 > th dose independent rect. 2 16
193 21.36 atmosphere 1015.0 270 < th dose independent rect. 2 16
195 21.36 radiation 40.0 270 < th dose dependent rect. 3 3
198 21.37 precipitation 0.1 270 < th dose independent rect. 3 3
203 21.37 precipitation 0.1 270 < th dose dependent rect. 3 3
213 21.39 humidity 50.0 270 > th dose independent rect. 7 6
215 21.39 precipitation 0.1 270 < th dose independent rect. 2 16
218 21.39 precipitation 0.1 270 < th dose dependent rect. 2 16
221 21.40 precipitation 0.1 270 < th dose independent rect. 6 21
227 21.40 precipitation 0.1 270 < th dose dependent rect. 6 21
268 21.46 atmosphere 995.0 270 > th dose independent rect. 13 18
279 21.47 radiation 1.0 10 > th dose independent rect. 17 15
281 21.47 temperature 10.0 270 > th dose dependent rect. 3 3
290 21.49 radiation 1.0 90 > th dose independent rect. 15 17
293 21.50 atmosphere 995.0 270 > th dose independent rect. 18 8
295 21.50 radiation 40.0 90 < th dose independent rect. 15 17
298 21.51 wind 1.0 10 > th dose independent rect. 8 6
324 21.52 temperature 10.0 270 > th dose dependent rect. 2 5
345 21.55 radiation 40.0 90 < th dose independent rect. 13 19
373 21.57 wind 9.0 270 < th dose independent rect. 14 16
374 21.57 wind 9.0 270 < th dose independent rect. 13 18
381 21.58 atmosphere 995.0 270 > th dose independent rect. 14 16
400 21.62 humidity 90.0 90 < th dose independent rect. 8 7
405 21.62 atmosphere 995.0 270 > th dose independent rect. 2 16
422 21.65 precipitation 0.1 270 < th dose independent rect. 13 18
423 21.65 precipitation 0.1 270 < th dose dependent rect. 13 18
430 21.67 precipitation 0.1 270 < th dose independent rect. 14 16
433 21.67 precipitation 0.1 270 < th dose dependent rect. 14 16
437 21.68 temperature 10.0 10 > th dose dependent rect. 5 3
449 21.71 wind 9.0 10 < th dose independent rect. 8 21
450 21.72 wind 5.0 10 < th dose independent rect. 5 3
456 21.73 wind 9.0 270 < th dose independent rect. 2 16
471 21.75 atmosphere 1015.0 270 < th dose independent rect. 7 18
473 21.75 precipitation 0.1 10 < th dose independent rect. 8 21
474 21.75 precipitation 0.1 10 < th dose dependent rect. 8 21
506 21.78 wind 9.0 10 < th dose dependent rect. 5 3
513 21.79 temperature 15.0 10 > th dose independent rect. 14 18
533 21.82 wind 9.0 90 < th dose independent rect. 4 15
539 21.83 temperature 10.0 10 > th dose independent rect. 5 3
541 21.83 temperature 30.0 10 < th dose independent rect. 5 3
542 21.83 humidity 50.0 10 > th dose independent rect. 5 3
544 21.83 atmosphere 995.0 10 > th dose independent rect. 5 3
545 21.83 atmosphere 1015.0 10 < th dose independent rect. 5 3
546 21.83 temperature 10.0 10 > th dose independent rect. 8 21
548 21.84 precipitation 0.1 10 < th dose independent rect. 5 3
550 21.84 wind 9.0 10 < th dose independent rect. 8 8
552 21.84 temperature 15.0 10 > th dose independent rect. 16 16
556 21.84 radiation 40.0 10 < th dose independent rect. 13 19
559 21.84 precipitation 0.1 10 < th dose dependent rect. 5 3
570 21.86 wind 9.0 10 < th dose independent rect. 8 6
571 21.86 temperature 10.0 10 > th dose independent rect. 8 6
573 21.86 atmosphere 995.0 10 > th dose independent rect. 8 6
574 21.86 atmosphere 1015.0 10 < th dose independent rect. 8 6
575 21.86 precipitation 0.1 10 < th dose independent rect. 8 6
581 21.86 precipitation 0.1 10 < th dose dependent rect. 8 6
597 21.89 atmosphere 995.0 10 > th dose independent rect. 8 8
603 21.90 temperature 10.0 270 > th dose dependent rect. 7 5
604 21.90 temperature 10.0 10 > th dose dependent rect. 14 18
606 21.91 temperature 10.0 10 > th dose independent rect. 8 8
608 21.91 atmosphere 1015.0 10 < th dose independent rect. 8 8
609 21.91 precipitation 0.1 10 < th dose independent rect. 8 8
612 21.91 precipitation 0.1 10 < th dose dependent rect. 8 8
624 21.93 radiation 1.0 10 > th dose independent rect. 8 6
641 21.93 wind 9.0 270 < th dose dependent rect. 18 8
643 21.94 radiation 40.0 10 < th dose independent rect. 5 3
702 21.96 humidity 50.0 10 > th dose independent rect. 8 21
713 21.97 wind 7.0 270 < th dose independent rect. 19 17
717 21.98 temperature 10.0 1440 > th dose independent rect. 9 6
722 21.98 temperature 10.0 1440 > th dose independent rect. 15 18
727 21.98 temperature 10.0 90 > th dose dependent rect. 14 18
729 21.99 wind 9.0 10 < th dose independent rect. 16 16
755 22.00 atmosphere 995.0 10 > th dose independent rect. 8 21
776 22.01 atmosphere 995.0 90 > th dose independent rect. 8 20
784 22.02 wind 9.0 10 < th dose independent rect. 14 18
791 22.02 temperature 10.0 270 > th dose dependent rect. 12 7
798 22.03 radiation 40.0 10 < th dose independent rect. 16 16
841 22.07 atmosphere 1000.0 270 > th dose independent rect. 12 7
843 22.07 precipitation 0.1 270 < th dose independent rect. 19 17
848 22.07 precipitation 0.1 270 < th dose dependent rect. 19 17
994 22.15 radiation 40.0 90 < th dose dependent rect. 4 15
995 22.16 wind 1.0 270 > th dose independent rect. 8 3