Os06g0112100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0112100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.85 | 0.49 | 9.2 | -1.01 | 1.53 | 1.82 | -0.97 | -2.92 | -0.541 | 20.3 | 15.72 | 841 | -- | -- |
| 114.57 | 0.499 | 9.13 | -0.454 | 1.43 | 1.92 | -1.62 | -- | -0.39 | 20.7 | 14.54 | 714 | -- | -- |
| 111.19 | 0.491 | 9.22 | -1.16 | 1.55 | 1.79 | -- | -3.67 | -0.584 | 20.3 | 16.21 | 845 | -- | -- |
| 122.41 | 0.515 | 9.13 | -0.401 | 1.56 | 1.84 | -- | -- | -0.384 | 20.2 | 12.98 | 858 | -- | -- |
| 204.31 | 0.666 | 9.23 | -1.38 | -- | 3.02 | -- | -3.75 | -0.776 | -- | 16.57 | 657 | -- | -- |
| 161.48 | 0.596 | 9.08 | 0.0438 | 1.89 | -- | -1.41 | -- | -0.0947 | 20.6 | -- | -- | -- | -- |
| 167.89 | 0.607 | 9.08 | 0.0903 | 1.9 | -- | -- | -- | -0.0938 | 20.6 | -- | -- | -- | -- |
| 216.58 | 0.685 | 9.13 | -0.68 | -- | 3.15 | -- | -- | -0.581 | -- | 10.81 | 656 | -- | -- |
| 126.12 | 0.523 | 9.12 | -- | 1.59 | 1.65 | -- | -- | -0.316 | 20.3 | 14.71 | 856 | -- | -- |
| 370.18 | 0.899 | 9.02 | 0.0833 | -- | -- | -- | -- | -0.111 | -- | -- | -- | -- | -- |
| 168.1 | 0.607 | 9.08 | -- | 1.9 | -- | -- | -- | -0.104 | 20.6 | -- | -- | -- | -- |
| 227.19 | 0.702 | 9.1 | -- | -- | 2.65 | -- | -- | -0.467 | -- | 16.26 | 644 | -- | -- |
| 370.36 | 0.898 | 9.03 | -- | -- | -- | -- | -- | -0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 2 | 105.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 5 | 105.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 6 | 105.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 21 | 106.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 23 | 106.67 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 33 | 107.06 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 34 | 107.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 35 | 107.07 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 42 | 107.32 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 43 | 107.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 19 |
| 76 | 108.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 100 | 108.48 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 115 | 108.68 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 141 | 109.06 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 145 | 109.08 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 178 | 109.47 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 190 | 109.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 243 | 110.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 269 | 110.56 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 272 | 110.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 312 | 111.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 362 | 111.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 369 | 111.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 420 | 111.84 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 444 | 112.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 451 | 112.08 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 524 | 112.54 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 570 | 112.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 584 | 112.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 673 | 113.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 11 |
| 678 | 113.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 13 |
| 696 | 113.43 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 819 | 113.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 12 | 17 |
| 836 | 113.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 858 | 114.01 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |