Os06g0112000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0112000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein prenyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.66 | 0.4 | 8.92 | 1.15 | 2.56 | 1.35 | -0.228 | 0.245 | -0.288 | 18.8 | 22.89 | 62 | -- | -- |
| 72.72 | 0.397 | 8.91 | 1.18 | 2.55 | 1.3 | -0.236 | -- | -0.28 | 18.8 | 23.05 | 57 | -- | -- |
| 72.77 | 0.397 | 8.92 | 1.15 | 2.55 | 1.36 | -- | 0.278 | -0.291 | 18.8 | 22.81 | 57 | -- | -- |
| 72.86 | 0.398 | 8.91 | 1.18 | 2.55 | 1.31 | -- | -- | -0.283 | 18.8 | 22.93 | 57 | -- | -- |
| 410.16 | 0.948 | 8.86 | 1.12 | -- | 1.32 | -- | 0.0542 | -0.323 | -- | 23.15 | 21 | -- | -- |
| 92.9 | 0.452 | 8.95 | 0.908 | 2.55 | -- | -0.24 | -- | -0.45 | 19.1 | -- | -- | -- | -- |
| 93.05 | 0.452 | 8.95 | 0.913 | 2.54 | -- | -- | -- | -0.45 | 19.1 | -- | -- | -- | -- |
| 409.79 | 0.947 | 8.86 | 1.13 | -- | 1.33 | -- | -- | -0.321 | -- | 23.15 | 9 | -- | -- |
| 106.3 | 0.483 | 8.96 | -- | 2.53 | 0.819 | -- | -- | -0.468 | 18.9 | 22.8 | 58 | -- | -- |
| 434.56 | 0.974 | 8.9 | 0.864 | -- | -- | -- | -- | -0.496 | -- | -- | -- | -- | -- |
| 115.01 | 0.502 | 8.98 | -- | 2.54 | -- | -- | -- | -0.552 | 19.1 | -- | -- | -- | -- |
| 441.08 | 0.981 | 8.9 | -- | -- | 0.933 | -- | -- | -0.489 | -- | 23.15 | 9 | -- | -- |
| 454.24 | 0.995 | 8.92 | -- | -- | -- | -- | -- | -0.592 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 3 | 60.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 6 | 61.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 7 | 61.32 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 17 |
| 10 | 61.76 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 18 |
| 34 | 64.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 57 | 65.29 | temperature | 30 | 90 | < th | dose dependent | sin | 9 | NA |
| 61 | 65.50 | temperature | 15 | 90 | > th | dose dependent | sin | 9 | NA |
| 63 | 65.55 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 9 |
| 168 | 67.66 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 14 |
| 171 | 67.70 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 23 |
| 174 | 67.72 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 192 | 67.96 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 228 | 68.30 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 21 |
| 343 | 69.36 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 367 | 69.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 544 | 70.75 | temperature | 20 | 30 | > th | dose independent | sin | 8 | NA |
| 545 | 70.75 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 12 |
| 579 | 70.98 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 628 | 71.33 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 19 |
| 679 | 71.64 | temperature | 20 | 90 | < th | dose independent | rect. | 13 | 22 |
| 725 | 71.82 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 16 |
| 790 | 72.18 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 21 |
| 857 | 72.44 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 23 |
| 948 | 72.82 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 17 |