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Os06g0107900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.21 (0.0291) R2 : 0.755
β1 : 1.1 (0.107) R2dD : 0.059 R2D : 0.0331
β2 : 2.47 (0.0712) R2dC : 0.648 R2C : 0.65
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.597 (0.0622) R2dN8 : 0.0665 R2N8 : 0.039
σ : 0.548
deviance : 136.78
__
_____
C
peak time of C : 2.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
117.43 0.509 9.18 1.13 1.75 0.993 0.295 -1.17 0.669 3.02 33.5 120 -- --
120.15 0.511 9.17 1.22 1.76 1.04 -0.119 -- 0.674 2.84 41.92 122 -- --
117.54 0.505 9.18 1.12 1.77 0.997 -- -0.96 0.665 2.98 36.11 120 -- --
119.97 0.51 9.18 1.13 1.82 1.08 -- -- 0.667 2.91 47.35 120 -- --
133.33 0.538 9.19 1.1 -- 2.15 -- -0.779 0.653 -- 9.766 295 -- --
135.35 0.545 9.21 1.08 2.47 -- -0.627 -- 0.593 2.38 -- -- -- --
136.78 0.548 9.21 1.1 2.47 -- -- -- 0.597 2.4 -- -- -- --
136.06 0.543 9.18 1.13 -- 2.17 -- -- 0.682 -- 10 300 -- --
152.87 0.576 9.21 -- 1.88 1.11 -- -- 0.537 2.9 55.77 115 -- --
497.24 1.04 9.19 1.2 -- -- -- -- 0.658 -- -- -- -- --
168.43 0.607 9.23 -- 2.49 -- -- -- 0.475 2.4 -- -- -- --
169.59 0.607 9.21 -- -- 2.19 -- -- 0.557 -- 10 304 -- --
535.24 1.08 9.22 -- -- -- -- -- 0.525 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.21 temperature 30 270 < th dose independent rect. 1 17
7 114.34 temperature 30 90 < th dose independent rect. 3 16
10 114.60 radiation 1 90 > th dose dependent rect. 12 23
11 114.98 radiation 1 10 > th dose dependent rect. 12 23
17 115.93 radiation 40 270 < th dose dependent rect. 24 12
25 116.40 radiation 40 270 < th dose dependent sin 5 NA
30 116.57 radiation 20 270 < th dose independent rect. 24 13
42 116.80 temperature 10 270 > th dose dependent rect. 5 10
48 116.87 radiation 20 270 < th dose independent rect. 24 15
51 116.91 radiation 20 270 < th dose independent rect. 24 17
71 117.41 radiation 40 270 < th dose dependent rect. 8 22
76 117.55 radiation 20 30 > th dose independent rect. 12 23
96 117.97 radiation 40 90 < th dose dependent rect. 13 23
101 118.02 radiation 20 270 < th dose dependent rect. 21 22
111 118.12 radiation 40 270 < th dose dependent rect. 8 11
113 118.12 radiation 40 30 < th dose dependent rect. 11 23
115 118.14 radiation 30 90 < th dose dependent rect. 15 22
144 118.47 radiation 10 270 > th dose independent rect. 17 22
171 118.65 radiation 10 270 > th dose independent sin 4 NA
179 118.76 radiation 40 720 < th dose dependent rect. 9 2
182 118.77 radiation 40 90 < th dose dependent no NA NA
186 118.80 temperature 15 10 > th dose dependent rect. 7 9
190 118.81 radiation 20 270 < th dose independent rect. 8 22
195 118.83 radiation 20 270 < th dose independent sin 6 NA
201 118.86 radiation 30 270 < th dose independent rect. 9 10
207 118.90 radiation 10 270 > th dose independent rect. 6 9
221 118.91 radiation 10 270 < th dose independent sin 4 NA
229 118.95 radiation 10 270 < th dose independent rect. 21 22
238 119.00 temperature 30 720 > th dose independent sin 7 NA
295 119.24 radiation 30 10 < th dose dependent rect. 9 23
311 119.30 radiation 10 270 < th dose independent rect. 6 23
317 119.31 radiation 30 10 < th dose dependent rect. 15 23
348 119.41 radiation 30 10 < th dose dependent no NA NA
382 119.56 radiation 40 90 < th dose dependent rect. 3 10
386 119.57 radiation 30 30 < th dose independent rect. 11 11
395 119.59 temperature 30 720 > th dose independent rect. 8 3
445 119.75 radiation 1 270 > th dose dependent sin 5 NA
451 119.77 temperature 15 270 > th dose independent rect. 5 10
461 119.79 temperature 30 90 < th dose dependent rect. 3 16
469 119.83 humidity 70 90 > th dose independent rect. 2 17
496 119.91 humidity 60 90 > th dose dependent rect. 10 11
503 119.95 radiation 40 90 > th dose independent rect. 12 23
521 120.02 temperature 10 270 > th dose dependent rect. 6 18
523 120.03 temperature 10 10 > th dose dependent sin 0 NA
529 120.05 radiation 20 720 < th dose independent rect. 9 2
549 120.12 humidity 70 270 > th dose independent rect. 24 19
561 120.16 radiation 40 30 < th dose dependent rect. 11 21
569 120.19 temperature 30 720 > th dose independent rect. 8 6
594 120.21 humidity 60 90 > th dose dependent rect. 3 16
618 120.30 temperature 10 90 > th dose dependent sin 1 NA
651 120.37 radiation 10 270 < th dose independent rect. 13 22
678 120.44 radiation 30 720 < th dose independent rect. 16 20
684 120.47 temperature 30 270 < th dose independent sin 5 NA
694 120.48 temperature 10 720 > th dose dependent rect. 16 6
700 120.50 radiation 10 90 < th dose independent rect. 15 23
702 120.51 radiation 1 270 > th dose dependent rect. 16 22
730 120.56 humidity 60 10 > th dose dependent rect. 11 10
732 120.57 humidity 70 10 < th dose independent rect. 12 23
747 120.60 radiation 10 90 < th dose independent no NA NA
750 120.60 radiation 40 720 < th dose dependent rect. 17 19
804 120.75 temperature 30 10 < th dose dependent rect. 4 15
808 120.76 temperature 30 90 < th dose dependent rect. 3 14
809 120.76 humidity 60 270 > th dose dependent rect. 24 19
850 120.87 radiation 10 10 < th dose independent rect. 13 23
854 120.88 radiation 1 270 > th dose dependent rect. 4 10
871 120.91 humidity 60 90 > th dose dependent rect. 2 19
872 120.92 radiation 10 10 < th dose independent no NA NA
881 120.94 radiation 10 10 < th dose independent rect. 15 23
885 120.95 radiation 10 10 < th dose independent rect. 9 23
910 121.00 atmosphere 1000 10 > th dose independent rect. 11 11
923 121.02 radiation 30 30 < th dose independent rect. 11 21
999 121.13 radiation 20 30 > th dose independent no NA NA
1000 121.13 radiation 20 30 > th dose independent rect. 7 10