Os06g0105200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0105200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.61 | 0.411 | 11.4 | 0.407 | 2.52 | 1.1 | -0.0108 | 0.133 | -0.0607 | 7.69 | 24.6 | 14 | -- | -- |
| 76.65 | 0.408 | 11.4 | 0.424 | 2.53 | 1.1 | -0.0251 | -- | -0.0587 | 7.7 | 24.6 | 13 | -- | -- |
| 76.61 | 0.408 | 11.4 | 0.406 | 2.52 | 1.1 | -- | 0.136 | -0.0609 | 7.69 | 24.6 | 13 | -- | -- |
| 76.65 | 0.408 | 11.4 | 0.423 | 2.52 | 1.1 | -- | -- | -0.0564 | 7.7 | 24.6 | 13 | -- | -- |
| 324.67 | 0.839 | 11.5 | 0.777 | -- | 1.94 | -- | -2.83 | -0.127 | -- | 34.9 | 529 | -- | -- |
| 94.06 | 0.455 | 11.4 | 0.169 | 2.51 | -- | 0.0677 | -- | -0.256 | 7.38 | -- | -- | -- | -- |
| 94.07 | 0.454 | 11.4 | 0.17 | 2.51 | -- | -- | -- | -0.256 | 7.38 | -- | -- | -- | -- |
| 300.75 | 0.808 | 11.4 | 0.858 | -- | 2.89 | -- | -- | 0.201 | -- | 35.77 | 521 | -- | -- |
| 80.95 | 0.421 | 11.4 | -- | 2.53 | 0.927 | -- | -- | -0.13 | 7.63 | 24.6 | 10 | -- | -- |
| 428.41 | 0.967 | 11.5 | 0.211 | -- | -- | -- | -- | -0.215 | -- | -- | -- | -- | -- |
| 94.84 | 0.456 | 11.4 | -- | 2.51 | -- | -- | -- | -0.275 | 7.38 | -- | -- | -- | -- |
| 318.59 | 0.831 | 11.4 | -- | -- | 2.58 | -- | -- | 0.0698 | -- | 44.23 | 512 | -- | -- |
| 429.59 | 0.967 | 11.5 | -- | -- | -- | -- | -- | -0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.19 | temperature | 15 | 90 | > th | dose dependent | sin | 10 | NA |
| 13 | 69.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 12 |
| 36 | 71.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 11 |
| 46 | 71.61 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 51 | 71.78 | temperature | 30 | 90 | < th | dose dependent | sin | 10 | NA |
| 64 | 72.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 13 |
| 87 | 72.66 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 109 | 72.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 18 |
| 212 | 73.88 | temperature | 20 | 720 | > th | dose dependent | sin | 16 | NA |
| 272 | 74.38 | temperature | 20 | 90 | > th | dose independent | sin | 11 | NA |
| 288 | 74.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 302 | 74.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 319 | 74.65 | temperature | 20 | 10 | > th | dose independent | sin | 10 | NA |
| 372 | 74.92 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 13 |
| 383 | 74.95 | temperature | 20 | 30 | > th | dose independent | rect. | 6 | 22 |
| 455 | 75.35 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 9 |
| 538 | 75.71 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 13 |
| 545 | 75.73 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 11 |
| 603 | 76.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 20 |
| 664 | 76.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 683 | 76.32 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 699 | 76.37 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 800 | 76.68 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 855 | 76.81 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 861 | 76.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 868 | 76.84 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 881 | 76.86 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 887 | 76.87 | radiation | 1 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 919 | 76.93 | radiation | 1 | 720 | < th | dose dependent | sin | 13 | NA |
| 939 | 76.96 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 963 | 77.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 971 | 77.06 | temperature | 20 | 90 | > th | dose independent | rect. | 22 | 13 |
| 998 | 77.16 | humidity | 50 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 1000 | 77.16 | humidity | 50 | 43200 | > th | dose independent | rect. | 23 | 11 |