Os06g0103200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os06g0103200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.27 | 0.542 | 6.6 | 1.59 | 0.601 | 0.611 | 0.869 | -2.4 | 0.714 | 8.08 | 81.58 | 310 | -- | -- |
| 147.73 | 0.566 | 6.58 | 1.46 | 0.616 | 0.592 | 0.504 | -- | 0.7 | 8.8 | 80.63 | 246 | -- | -- |
| 134.87 | 0.541 | 6.6 | 1.59 | 0.636 | 0.587 | -- | -2.14 | 0.71 | 8.16 | 81.57 | 256 | -- | -- |
| 148.32 | 0.567 | 6.58 | 1.49 | 0.595 | 0.568 | -- | -- | 0.704 | 7.69 | 82 | 391 | -- | -- |
| 147.09 | 0.565 | 6.59 | 1.67 | -- | 1.1 | -- | -2.1 | 0.763 | -- | 73.43 | 506 | -- | -- |
| 155.22 | 0.584 | 6.59 | 1.57 | 0.91 | -- | -0.0897 | -- | 0.629 | 6.99 | -- | -- | -- | -- |
| 155.24 | 0.583 | 6.59 | 1.56 | 0.909 | -- | -- | -- | 0.63 | 7.02 | -- | -- | -- | -- |
| 155.29 | 0.58 | 6.59 | 1.55 | -- | 1.14 | -- | -- | 0.735 | -- | 71.63 | 604 | -- | -- |
| 205.34 | 0.667 | 6.61 | -- | 0.496 | 0.825 | -- | -- | 0.589 | 7.88 | 84.27 | 382 | -- | -- |
| 198.72 | 0.659 | 6.61 | 1.58 | -- | -- | -- | -- | 0.646 | -- | -- | -- | -- | -- |
| 219.79 | 0.693 | 6.63 | -- | 0.927 | -- | -- | -- | 0.455 | 6.92 | -- | -- | -- | -- |
| 212.69 | 0.679 | 6.61 | -- | -- | 1.23 | -- | -- | 0.631 | -- | 81.69 | 485 | -- | -- |
| 264.84 | 0.76 | 6.65 | -- | -- | -- | -- | -- | 0.471 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.31 | humidity | 80 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 12 | 131.27 | humidity | 60 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 20 | 131.61 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 63 | 132.53 | humidity | 90 | 270 | > th | dose independent | rect. | 12 | 20 |
| 113 | 133.03 | humidity | 90 | 270 | > th | dose independent | rect. | 19 | 13 |
| 118 | 133.07 | humidity | 90 | 270 | > th | dose independent | rect. | 17 | 15 |
| 138 | 133.23 | humidity | 80 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 142 | 133.26 | humidity | 80 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 176 | 133.47 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 16 |
| 178 | 133.47 | humidity | 60 | 720 | > th | dose dependent | sin | 12 | NA |
| 200 | 133.59 | humidity | 80 | 270 | > th | dose dependent | no | NA | NA |
| 208 | 133.64 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 218 | 133.68 | humidity | 90 | 270 | > th | dose dependent | sin | 13 | NA |
| 253 | 133.87 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 16 |
| 273 | 133.92 | humidity | 80 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 278 | 133.96 | humidity | 80 | 270 | > th | dose dependent | sin | 9 | NA |
| 295 | 134.03 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 307 | 134.08 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 347 | 134.28 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 380 | 134.41 | humidity | 90 | 270 | > th | dose independent | sin | 11 | NA |
| 391 | 134.44 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 438 | 134.60 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 439 | 134.61 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 503 | 134.87 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 550 | 134.97 | humidity | 90 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 624 | 135.16 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 15 |
| 625 | 135.16 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 700 | 135.29 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 7 | 22 |
| 733 | 135.38 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 766 | 135.48 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 792 | 135.53 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 794 | 135.53 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 839 | 135.67 | humidity | 90 | 270 | < th | dose independent | rect. | 20 | 23 |
| 860 | 135.69 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 871 | 135.70 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 927 | 135.71 | humidity | 60 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 969 | 135.80 | humidity | 90 | 270 | < th | dose independent | rect. | 18 | 23 |