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Os06g0103100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.71 (0.0242) R2 : 0.782
β1 : 1.13 (0.0888) R2dD : 0.0806 R2D : 0.0606
β2 : 1.36 (0.0618) R2dC : 0.263 R2C : -0.0409
β3 : 3.23 (0.0864) R2dE : 0.756 R2E : 0.445
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0243 (0.0518) R2dN8 : 0.000141 R2N8 : -0.00207
σ : 0.453
deviance : 94.68
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_____
C
peak time of C : 13.5
E
wheather : radiation
threshold : 3.841
memory length : 758
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.14 0.453 6.72 1.08 1.37 3.21 0.383 1.05 0.0122 13.5 3.78 758 -- --
94.52 0.453 6.71 1.12 1.34 3.14 0.211 -- 0.0194 13.3 3.912 758 -- --
93.66 0.451 6.72 1.1 1.35 3.2 -- 0.86 0.0151 13.5 3.78 760 -- --
94.68 0.453 6.71 1.13 1.36 3.23 -- -- 0.0243 13.5 3.841 758 -- --
112.59 0.494 6.72 1.17 -- 3.32 -- 1.02 0.0837 -- 2.982 1004 -- --
115.33 0.503 6.69 0.92 2.29 -- 0.856 -- -0.12 8.26 -- -- -- --
117.59 0.508 6.69 0.945 2.28 -- -- -- -0.121 8.26 -- -- -- --
114.16 0.498 6.71 1.23 -- 3.32 -- -- 0.108 -- 3.195 1003 -- --
126.26 0.523 6.74 -- 1.35 2.8 -- -- -0.126 12.7 5.714 736 -- --
406.27 0.942 6.75 0.961 -- -- -- -- -0.0952 -- -- -- -- --
141.15 0.556 6.72 -- 2.29 -- -- -- -0.226 8.23 -- -- -- --
152.25 0.575 6.74 -- -- 3.28 -- -- -0.0266 -- 4.766 984 -- --
430.64 0.969 6.78 -- -- -- -- -- -0.202 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.35 radiation 1.0 720 > th dose independent rect. 15 20
2 88.83 temperature 10.0 720 > th dose dependent rect. 15 3
4 89.08 temperature 10.0 270 > th dose dependent rect. 22 12
6 90.12 radiation 1.0 720 < th dose independent rect. 3 20
7 90.29 radiation 1.0 720 < th dose dependent rect. 3 20
10 90.41 radiation 1.0 720 < th dose dependent rect. 17 6
14 90.86 radiation 1.0 720 > th dose independent rect. 15 4
25 90.99 temperature 30.0 90 < th dose dependent rect. 19 12
26 91.10 radiation 1.0 720 > th dose independent rect. 15 22
44 92.31 radiation 1.0 720 < th dose independent rect. 17 6
55 93.10 temperature 10.0 270 > th dose dependent rect. 15 11
60 93.20 radiation 1.0 720 > th dose independent rect. 7 22
61 93.21 radiation 1.0 720 > th dose independent rect. 7 12
103 93.80 radiation 20.0 720 < th dose dependent rect. 3 4
105 93.81 radiation 1.0 720 < th dose dependent rect. 7 15
107 93.83 temperature 10.0 270 > th dose dependent rect. 5 22
122 94.26 temperature 30.0 270 < th dose dependent rect. 10 20
129 94.46 radiation 1.0 720 < th dose independent rect. 7 16
130 94.46 temperature 30.0 720 < th dose dependent rect. 19 2
158 94.86 radiation 1.0 720 > th dose independent sin 13 NA
183 95.03 radiation 30.0 720 < th dose dependent rect. 17 14
190 95.08 atmosphere 995.0 720 > th dose independent rect. 10 5
194 95.20 temperature 15.0 270 > th dose dependent rect. 15 20
199 95.24 temperature 20.0 270 > th dose dependent rect. 16 18
200 95.25 precipitation 0.1 720 < th dose independent rect. 22 5
201 95.25 precipitation 0.1 720 < th dose dependent rect. 22 5
254 95.70 temperature 10.0 90 > th dose dependent sin 9 NA
255 95.72 radiation 10.0 720 < th dose dependent sin 12 NA
259 95.75 temperature 25.0 720 > th dose independent rect. 16 1
268 95.86 temperature 25.0 720 > th dose independent rect. 15 4
270 95.92 temperature 30.0 90 < th dose dependent sin 9 NA
271 95.93 precipitation 0.1 720 < th dose independent rect. 6 21
272 95.93 precipitation 0.1 720 < th dose dependent rect. 6 21
279 96.00 temperature 15.0 720 > th dose independent rect. 7 11
291 96.14 precipitation 0.1 720 < th dose independent rect. 15 19
293 96.14 precipitation 0.1 720 < th dose dependent rect. 15 19
297 96.19 temperature 10.0 720 > th dose independent rect. 22 5
298 96.19 temperature 30.0 720 < th dose independent rect. 22 5
299 96.19 humidity 50.0 720 > th dose independent rect. 22 5
302 96.19 atmosphere 995.0 720 > th dose independent rect. 22 5
303 96.19 radiation 1.0 720 < th dose independent rect. 22 5
309 96.19 temperature 10.0 720 > th dose independent rect. 3 19
310 96.19 radiation 1.0 720 < th dose dependent rect. 22 5
315 96.20 radiation 10.0 720 < th dose independent rect. 3 4
319 96.22 radiation 1.0 720 < th dose independent sin 13 NA
321 96.23 atmosphere 1015.0 720 < th dose independent rect. 22 5
322 96.23 atmosphere 995.0 720 > th dose independent rect. 18 21
323 96.24 temperature 10.0 720 > th dose independent rect. 10 5
324 96.24 atmosphere 1015.0 720 < th dose independent rect. 10 5
325 96.24 temperature 10.0 720 > th dose independent rect. 15 19
327 96.26 humidity 90.0 720 < th dose independent rect. 15 3
329 96.30 wind 9.0 720 < th dose independent rect. 22 5
360 96.53 radiation 1.0 720 > th dose dependent rect. 16 1
363 96.54 wind 1.0 720 > th dose independent rect. 15 3
381 96.64 temperature 15.0 720 > th dose independent rect. 15 3
384 96.65 radiation 1.0 720 < th dose dependent rect. 17 12
397 96.73 radiation 1.0 720 > th dose dependent rect. 15 18
405 96.82 wind 9.0 720 < th dose independent rect. 15 19
408 96.83 precipitation 0.1 720 < th dose independent rect. 7 11
410 96.83 precipitation 0.1 720 < th dose dependent rect. 7 11
424 96.90 humidity 50.0 720 > th dose independent rect. 17 14
436 96.98 precipitation 0.1 720 < th dose independent rect. 15 3
437 96.98 precipitation 0.1 720 < th dose dependent rect. 15 3
442 97.01 atmosphere 995.0 720 > th dose independent rect. 18 13
445 97.02 wind 7.0 720 < th dose independent rect. 3 3
450 97.06 temperature 15.0 720 > th dose independent rect. 6 13
458 97.13 wind 9.0 720 < th dose independent rect. 15 3
464 97.19 temperature 30.0 720 < th dose independent rect. 18 13
467 97.20 radiation 1.0 720 > th dose independent no NA NA
468 97.20 radiation 1.0 720 > th dose independent rect. 4 15
514 97.20 radiation 1.0 720 < th dose dependent rect. 17 20
515 97.21 temperature 30.0 720 < th dose independent rect. 18 4
527 97.23 radiation 1.0 720 < th dose independent rect. 15 20
531 97.25 humidity 70.0 720 > th dose independent rect. 19 11
539 97.27 precipitation 0.1 720 < th dose independent rect. 6 13
541 97.27 precipitation 0.1 720 < th dose dependent rect. 6 13
550 97.30 radiation 1.0 720 < th dose independent rect. 7 23
571 97.44 atmosphere 1015.0 720 < th dose independent rect. 15 3
572 97.44 temperature 10.0 720 > th dose independent rect. 18 21
576 97.45 temperature 10.0 720 > th dose independent rect. 3 3
577 97.45 temperature 30.0 720 < th dose independent rect. 3 3
578 97.45 humidity 50.0 720 > th dose independent rect. 3 3
581 97.45 atmosphere 995.0 720 > th dose independent rect. 3 3
585 97.45 radiation 1.0 720 < th dose independent rect. 16 14
587 97.45 temperature 10.0 720 > th dose independent rect. 6 21
590 97.47 precipitation 0.1 720 < th dose independent rect. 15 12
592 97.47 precipitation 0.1 720 < th dose dependent rect. 15 12
651 97.65 temperature 20.0 30 > th dose dependent rect. 1 3
662 97.69 temperature 10.0 720 > th dose dependent rect. 22 5
680 97.74 wind 7.0 720 < th dose independent rect. 6 5
681 97.74 precipitation 0.1 720 < th dose independent rect. 10 5
683 97.74 precipitation 0.1 720 < th dose dependent rect. 10 5
699 97.81 temperature 15.0 720 > th dose independent rect. 6 5
701 97.81 wind 9.0 720 < th dose independent rect. 6 21
705 97.82 temperature 15.0 270 > th dose independent rect. 22 12
713 97.84 atmosphere 995.0 720 > th dose independent rect. 3 12
722 97.88 radiation 1.0 720 > th dose independent rect. 7 3
728 97.90 radiation 40.0 720 < th dose independent rect. 15 3
736 97.92 radiation 1.0 720 > th dose dependent rect. 16 14
792 98.07 radiation 1.0 720 < th dose independent no NA NA
818 98.12 wind 9.0 720 < th dose independent rect. 19 11
819 98.12 wind 9.0 720 < th dose independent rect. 18 13
823 98.13 radiation 20.0 720 < th dose independent rect. 18 13
852 98.20 radiation 10.0 720 < th dose dependent rect. 3 14
868 98.23 radiation 1.0 720 < th dose dependent rect. 7 23
869 98.24 wind 9.0 720 < th dose independent rect. 7 11
884 98.29 atmosphere 1015.0 720 < th dose independent rect. 7 11
885 98.29 temperature 10.0 720 > th dose independent rect. 18 13
891 98.30 temperature 20.0 90 > th dose independent rect. 7 21
903 98.33 wind 9.0 720 < th dose independent rect. 6 13
912 98.35 atmosphere 1015.0 720 < th dose independent rect. 23 19
916 98.36 temperature 10.0 720 > th dose independent rect. 19 11
918 98.36 humidity 50.0 720 > th dose independent rect. 19 11
919 98.36 atmosphere 995.0 720 > th dose independent rect. 19 11
920 98.36 radiation 20.0 720 < th dose independent rect. 19 11
924 98.36 atmosphere 1015.0 720 < th dose independent rect. 6 13
927 98.37 radiation 1.0 720 < th dose dependent sin 23 NA
934 98.40 precipitation 0.1 720 < th dose independent rect. 23 19
936 98.40 precipitation 0.1 720 < th dose dependent rect. 23 19
943 98.43 wind 3.0 720 > th dose independent rect. 16 1
949 98.44 temperature 30.0 90 < th dose dependent rect. 3 22
958 98.47 humidity 60.0 720 > th dose independent rect. 18 5
966 98.49 temperature 30.0 720 < th dose dependent rect. 10 12
969 98.50 radiation 1.0 720 < th dose independent rect. 19 23
979 98.55 wind 7.0 720 < th dose independent rect. 7 3