Os05g0597700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0597700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.02 | 0.583 | 2.82 | 0.0318 | 0.209 | 1.22 | -0.668 | 2.79 | 0.0385 | 5.6 | 4.965 | 419 | -- | -- |
| 155.77 | 0.581 | 2.79 | -0.0305 | 0.233 | 0.688 | -0.787 | -- | 0.0367 | 4.97 | 4.368 | 406 | -- | -- |
| 155 | 0.58 | 2.82 | 0.0219 | 0.191 | 1.21 | -- | 3.09 | 0.0412 | 5.66 | 5.067 | 418 | -- | -- |
| 157.31 | 0.584 | 2.79 | -0.0471 | 0.187 | 0.481 | -- | -- | 0.0534 | 5.09 | 4.258 | 343 | -- | -- |
| 156.38 | 0.582 | 2.82 | 0.00761 | -- | 1.16 | -- | 3.33 | 0.0416 | -- | 5.451 | 457 | -- | -- |
| 158.39 | 0.59 | 2.79 | -0.132 | 0.0894 | -- | -0.61 | -- | 0.0411 | 5.21 | -- | -- | -- | -- |
| 159.25 | 0.591 | 2.79 | -0.133 | 0.0908 | -- | -- | -- | 0.0436 | 3.73 | -- | -- | -- | -- |
| 154.37 | 0.579 | 2.78 | -0.045 | -- | 0.889 | -- | -- | 0.117 | -- | 11.5 | 1066 | -- | -- |
| 157.36 | 0.584 | 2.79 | -- | 0.187 | 0.513 | -- | -- | 0.0594 | 4.99 | 4.338 | 349 | -- | -- |
| 159.7 | 0.591 | 2.79 | -0.129 | -- | -- | -- | -- | 0.0461 | -- | -- | -- | -- | -- |
| 159.71 | 0.591 | 2.79 | -- | 0.0882 | -- | -- | -- | 0.0585 | 3.74 | -- | -- | -- | -- |
| 154.26 | 0.578 | 2.78 | -- | -- | 0.819 | -- | -- | 0.081 | -- | 11.46 | 1174 | -- | -- |
| 160.14 | 0.591 | 2.79 | -- | -- | -- | -- | -- | 0.0604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.47 | wind | 7.0 | 90 | > th | dose dependent | rect. | 14 | 2 |
| 4 | 143.12 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 14 | 143.12 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 47 | 147.34 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 65 | 148.41 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 73 | 148.55 | wind | 3.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 86 | 149.12 | wind | 7.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 88 | 149.15 | wind | 7.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 91 | 149.21 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 132 | 150.09 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 137 | 150.16 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 171 | 150.70 | wind | 7.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 183 | 150.83 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 2 |
| 186 | 150.83 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 4 |
| 210 | 150.83 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 212 | 150.83 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 240 | 150.84 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 308 | 150.97 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 20 | 11 |
| 309 | 150.99 | radiation | 10.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 334 | 151.14 | wind | 7.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 343 | 151.23 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 6 |
| 350 | 151.26 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 4 |
| 352 | 151.26 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 4 |
| 362 | 151.32 | humidity | 80.0 | 30 | < th | dose independent | rect. | 20 | 11 |
| 396 | 151.45 | wind | 7.0 | 30 | > th | dose dependent | rect. | 15 | 14 |
| 426 | 151.53 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 435 | 151.57 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 457 | 151.61 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 529 | 151.90 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 546 | 151.96 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 15 | 17 |
| 564 | 152.03 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 20 | 7 |
| 575 | 152.06 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 21 | 5 |
| 579 | 152.07 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 597 | 152.12 | humidity | 80.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 598 | 152.13 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 613 | 152.17 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 7 | 3 |
| 639 | 152.20 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 643 | 152.20 | wind | 9.0 | 270 | > th | dose dependent | rect. | 1 | 15 |
| 689 | 152.29 | humidity | 80.0 | 30 | < th | dose independent | rect. | 20 | 7 |
| 704 | 152.32 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 6 | 2 |
| 705 | 152.32 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 710 | 152.32 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 14 | 19 |
| 715 | 152.34 | temperature | 20.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 723 | 152.34 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 764 | 152.41 | radiation | 20.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 797 | 152.46 | wind | 7.0 | 720 | < th | dose independent | rect. | 21 | 7 |
| 810 | 152.49 | humidity | 80.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 819 | 152.50 | wind | 9.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 878 | 152.62 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 891 | 152.63 | humidity | 80.0 | 90 | > th | dose independent | sin | 8 | NA |
| 964 | 152.75 | humidity | 70.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 968 | 152.75 | humidity | 80.0 | 90 | > th | dose independent | rect. | 15 | 18 |
| 969 | 152.75 | radiation | 20.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 980 | 152.76 | humidity | 80.0 | 30 | > th | dose independent | rect. | 14 | 20 |
| 986 | 152.76 | wind | 1.0 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 987 | 152.77 | humidity | 60.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 1000 | 152.78 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 1 |