Os05g0595200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Allergen V5/Tpx-1 related family protein.
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Os05g0595200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Allergen V5/Tpx-1 related family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.33 | 0.566 | 3.1 | 0.331 | 0.334 | 0.269 | 0.717 | 0.599 | -0.0826 | 3.06 | 21 | 84 | -- | -- |
| 146.88 | 0.569 | 3.11 | 0.198 | 0.322 | 0.234 | 0.318 | -- | -0.11 | 3.25 | 21 | 84 | -- | -- |
| 146.53 | 0.564 | 3.11 | 0.25 | 0.351 | 0.271 | -- | 0.302 | -0.102 | 3.24 | 21 | 75 | -- | -- |
| 147.02 | 0.565 | 3.11 | 0.186 | 0.329 | 0.238 | -- | -- | -0.113 | 3.32 | 21 | 74 | -- | -- |
| 152.13 | 0.574 | 3.1 | 0.317 | -- | 0.122 | -- | 0.343 | -0.0839 | -- | 22.7 | 133 | -- | -- |
| 149.51 | 0.573 | 3.1 | 0.255 | 0.265 | -- | 0.288 | -- | -0.058 | 3.76 | -- | -- | -- | -- |
| 149.76 | 0.573 | 3.1 | 0.25 | 0.267 | -- | -- | -- | -0.0597 | 3.81 | -- | -- | -- | -- |
| 152.48 | 0.575 | 3.11 | 0.208 | -- | 0.14 | -- | -- | -0.108 | -- | 23.08 | 321 | -- | -- |
| 147.87 | 0.566 | 3.12 | -- | 0.34 | 0.271 | -- | -- | -0.141 | 3.29 | 21.05 | 75 | -- | -- |
| 153.7 | 0.579 | 3.1 | 0.261 | -- | -- | -- | -- | -0.0525 | -- | -- | -- | -- | -- |
| 151.41 | 0.576 | 3.11 | -- | 0.272 | -- | -- | -- | -0.0876 | 3.8 | -- | -- | -- | -- |
| 152.36 | 0.575 | 3.12 | -- | -- | 0.167 | -- | -- | -0.192 | -- | 24.2 | 1025 | -- | -- |
| 155.5 | 0.582 | 3.11 | -- | -- | -- | -- | -- | -0.0815 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.20 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 2 | 134.84 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 9 | 138.32 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 1 |
| 10 | 138.32 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 17 | 140.79 | radiation | 30.0 | 90 | > th | dose independent | rect. | 7 | 2 |
| 55 | 141.58 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 92 | 141.62 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 95 | 141.80 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 97 | 141.84 | radiation | 40.0 | 30 | > th | dose independent | sin | 11 | NA |
| 99 | 141.96 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 102 | 142.03 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 115 | 142.08 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 174 | 142.41 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 196 | 142.47 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 7 | 2 |
| 211 | 142.49 | radiation | 40.0 | 30 | < th | dose independent | sin | 11 | NA |
| 264 | 142.87 | humidity | 60.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 279 | 142.92 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 296 | 142.95 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 2 | 8 |
| 298 | 142.96 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 1 |
| 300 | 142.96 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 305 | 143.01 | wind | 1.0 | 10 | > th | dose independent | rect. | 2 | 8 |
| 353 | 143.18 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 378 | 143.40 | wind | 1.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 380 | 143.41 | temperature | 20.0 | 90 | > th | dose independent | rect. | 2 | 9 |
| 410 | 143.50 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 415 | 143.53 | wind | 3.0 | 30 | < th | dose independent | rect. | 3 | 1 |
| 420 | 143.55 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 429 | 143.60 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 23 |
| 436 | 143.64 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 459 | 143.67 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 23 |
| 490 | 143.74 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 522 | 143.81 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 552 | 143.88 | radiation | 20.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 560 | 143.92 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 601 | 143.98 | temperature | 20.0 | 90 | > th | dose independent | rect. | 2 | 21 |
| 631 | 144.05 | wind | 3.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 653 | 144.13 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 662 | 144.14 | temperature | 15.0 | 10 | > th | dose independent | rect. | 4 | 23 |
| 668 | 144.17 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 672 | 144.18 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 674 | 144.18 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 675 | 144.18 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 678 | 144.18 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 681 | 144.18 | radiation | 1.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 687 | 144.18 | temperature | 25.0 | 10 | < th | dose independent | rect. | 4 | 23 |
| 688 | 144.18 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 698 | 144.20 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 700 | 144.20 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 701 | 144.21 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 709 | 144.24 | wind | 3.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 758 | 144.30 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 23 |
| 759 | 144.30 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 763 | 144.31 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 772 | 144.34 | temperature | 25.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 791 | 144.38 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 8 |
| 793 | 144.38 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 802 | 144.40 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 825 | 144.42 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 829 | 144.43 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 3 |
| 867 | 144.46 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 870 | 144.46 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 874 | 144.46 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 880 | 144.46 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 881 | 144.46 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 902 | 144.46 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 906 | 144.47 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 914 | 144.49 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 918 | 144.49 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 920 | 144.49 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 925 | 144.50 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 927 | 144.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 930 | 144.50 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 931 | 144.50 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 934 | 144.50 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 935 | 144.50 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 937 | 144.50 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 942 | 144.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 944 | 144.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 947 | 144.50 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 952 | 144.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 955 | 144.51 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 964 | 144.52 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 968 | 144.53 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 15 |