Os05g0593800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual specificity kinase 1.
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Os05g0593800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dual specificity kinase 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.19 | 0.24 | 11.2 | -0.818 | 0.348 | 0.601 | -0.228 | -0.0392 | -0.0364 | 6.39 | 21.59 | 1392 | -- | -- |
| 26.19 | 0.238 | 11.2 | -0.808 | 0.348 | 0.604 | -0.231 | -- | -0.0342 | 6.39 | 21.58 | 1392 | -- | -- |
| 26.31 | 0.239 | 11.2 | -0.821 | 0.347 | 0.613 | -- | -0.027 | -0.0348 | 6.3 | 21.49 | 1388 | -- | -- |
| 26.31 | 0.239 | 11.2 | -0.813 | 0.347 | 0.612 | -- | -- | -0.0319 | 6.3 | 21.4 | 1388 | -- | -- |
| 32.55 | 0.266 | 11.2 | -0.814 | -- | 0.623 | -- | -0.0177 | -0.0303 | -- | 21.5 | 1381 | -- | -- |
| 37.08 | 0.285 | 11.2 | -0.559 | 0.361 | -- | -0.231 | -- | 0.142 | 6.12 | -- | -- | -- | -- |
| 37.2 | 0.286 | 11.2 | -0.561 | 0.36 | -- | -- | -- | 0.142 | 6.04 | -- | -- | -- | -- |
| 32.56 | 0.266 | 11.2 | -0.816 | -- | 0.624 | -- | -- | -0.0299 | -- | 21.4 | 1387 | -- | -- |
| 39.84 | 0.294 | 11.2 | -- | 0.384 | 0.347 | -- | -- | 0.102 | 6.74 | 22.35 | 903 | -- | -- |
| 43.93 | 0.31 | 11.2 | -0.551 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 45.51 | 0.316 | 11.2 | -- | 0.352 | -- | -- | -- | 0.205 | 6.12 | -- | -- | -- | -- |
| 46.02 | 0.316 | 11.2 | -- | -- | 0.367 | -- | -- | 0.0729 | -- | 22.3 | 1338 | -- | -- |
| 51.94 | 0.336 | 11.2 | -- | -- | -- | -- | -- | 0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 14 |
| 7 | 26.42 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 56 | 26.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 73 | 26.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 128 | 26.72 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 135 | 26.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 137 | 26.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 151 | 26.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 152 | 26.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 177 | 26.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 369 | 26.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 410 | 27.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 428 | 27.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 463 | 27.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 490 | 27.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 521 | 27.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 536 | 27.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 604 | 27.18 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 637 | 27.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 655 | 27.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 695 | 27.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 795 | 27.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |