Os05g0593300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0593300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.25 | 0.222 | 11.1 | 0.822 | 0.435 | -0.231 | 0.0862 | 2.47 | 0.261 | 6.91 | 19.98 | 1853 | -- | -- |
| 26.91 | 0.243 | 11.2 | 0.137 | 0.433 | -0.256 | -0.00793 | -- | 0.0825 | 7.59 | 17.08 | 9459 | -- | -- |
| 22.25 | 0.22 | 11.1 | 0.836 | 0.43 | -0.24 | -- | 2.49 | 0.26 | 6.88 | 20.48 | 1836 | -- | -- |
| 26.87 | 0.243 | 11.2 | 0.14 | 0.432 | -0.297 | -- | -- | 0.0836 | 7.6 | 13.88 | 10238 | -- | -- |
| 31.94 | 0.263 | 11.1 | 0.85 | -- | -0.298 | -- | 2.47 | 0.278 | -- | 20.29 | 1892 | -- | -- |
| 27.72 | 0.247 | 11.2 | 0.0829 | 0.456 | -- | -0.0396 | -- | 0.0418 | 6.88 | -- | -- | -- | -- |
| 27.72 | 0.247 | 11.2 | 0.0822 | 0.456 | -- | -- | -- | 0.042 | 6.9 | -- | -- | -- | -- |
| 36.33 | 0.281 | 11.2 | -0.221 | -- | 0.302 | -- | -- | -0.0329 | -- | 33.12 | 47520 | -- | -- |
| 27.34 | 0.245 | 11.2 | -- | 0.438 | -0.229 | -- | -- | 0.06 | 7.41 | 11.76 | 9402 | -- | -- |
| 38.61 | 0.29 | 11.2 | 0.0919 | -- | -- | -- | -- | 0.0506 | -- | -- | -- | -- | -- |
| 27.9 | 0.247 | 11.2 | -- | 0.457 | -- | -- | -- | 0.0328 | 6.88 | -- | -- | -- | -- |
| 36.93 | 0.283 | 11.2 | -- | -- | 0.19 | -- | -- | 0.00571 | -- | 32.9 | 47520 | -- | -- |
| 38.83 | 0.291 | 11.2 | -- | -- | -- | -- | -- | 0.0404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.44 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 2 | 21.59 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 3 | 21.71 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 4 | 21.77 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 5 | 21.84 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 6 | 21.85 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 10 | 21.86 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 15 | 21.87 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 16 | 21.88 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 17 | 21.92 | temperature | 15 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 19 | 21.97 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 20 | 21.97 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 34 | 21.99 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 45 | 22.01 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 46 | 22.01 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 54 | 22.02 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 55 | 22.02 | temperature | 15 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 63 | 22.03 | temperature | 30 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 73 | 22.04 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 92 | 22.06 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 120 | 22.08 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 138 | 22.08 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 168 | 22.10 | temperature | 30 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 176 | 22.10 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 192 | 22.11 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 205 | 22.11 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 231 | 22.12 | temperature | 15 | 43200 | > th | dose dependent | sin | 11 | NA |
| 255 | 22.13 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 280 | 22.14 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 282 | 22.14 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 455 | 22.19 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 459 | 22.19 | temperature | 30 | 43200 | < th | dose dependent | sin | 11 | NA |
| 474 | 22.19 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 10 |
| 526 | 22.20 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 559 | 22.21 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 571 | 22.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 6 |
| 612 | 22.22 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 666 | 22.23 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 667 | 22.23 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 672 | 22.23 | radiation | 1 | 43200 | < th | dose dependent | sin | 4 | NA |
| 772 | 22.24 | radiation | 1 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 773 | 22.24 | radiation | 1 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 869 | 22.25 | temperature | 20 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 875 | 22.25 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 877 | 22.25 | temperature | 15 | 43200 | > th | dose dependent | no | NA | NA |
| 959 | 22.25 | temperature | 15 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 964 | 22.26 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 965 | 22.26 | temperature | 20 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 966 | 22.26 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 18 | 2 |