Os05g0589700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual-specific kinase DSK1.
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Os05g0589700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dual-specific kinase DSK1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.63 | 0.561 | 9.72 | -0.352 | 0.495 | 2.33 | -0.716 | 2.93 | 0.332 | 20.6 | 7.336 | 5732 | -- | -- |
| 149.94 | 0.57 | 9.83 | -0.982 | 0.496 | 2.15 | -0.736 | -- | 0.156 | 20.6 | 11.89 | 5737 | -- | -- |
| 144.25 | 0.559 | 9.72 | -0.316 | 0.5 | 2.33 | -- | 2.98 | 0.336 | 20.4 | 7.144 | 5731 | -- | -- |
| 149.53 | 0.57 | 9.81 | -0.706 | 0.477 | 1.6 | -- | -- | 0.242 | 20.7 | 21.51 | 5809 | -- | -- |
| 156.67 | 0.583 | 9.72 | -0.328 | -- | 2.38 | -- | 3.07 | 0.29 | -- | -0.1146 | 6366 | -- | -- |
| 227.48 | 0.707 | 9.73 | 0.048 | 0.498 | -- | -0.634 | -- | 0.621 | 21.1 | -- | -- | -- | -- |
| 228.89 | 0.708 | 9.73 | 0.0705 | 0.5 | -- | -- | -- | 0.622 | 21.1 | -- | -- | -- | -- |
| 161.59 | 0.592 | 9.79 | -0.657 | -- | 1.63 | -- | -- | 0.283 | -- | 21.5 | 5236 | -- | -- |
| 158 | 0.585 | 9.77 | -- | 0.488 | 1.33 | -- | -- | 0.422 | 20.4 | 23.05 | 5752 | -- | -- |
| 243.33 | 0.729 | 9.72 | 0.0717 | -- | -- | -- | -- | 0.619 | -- | -- | -- | -- | -- |
| 229.02 | 0.708 | 9.73 | -- | 0.5 | -- | -- | -- | 0.614 | 21.1 | -- | -- | -- | -- |
| 164.24 | 0.597 | 9.77 | -- | -- | 1.52 | -- | -- | 0.358 | -- | 22.3 | 2065 | -- | -- |
| 243.46 | 0.728 | 9.72 | -- | -- | -- | -- | -- | 0.611 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.97 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 2 | 146.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 3 | 146.37 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 4 | 146.60 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 6 | 146.65 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 7 | 146.68 | temperature | 25 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 8 | 146.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 123 | 148.57 | temperature | 20 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 172 | 148.93 | temperature | 15 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 180 | 149.00 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 185 | 149.01 | temperature | 25 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 207 | 149.10 | temperature | 25 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 216 | 149.15 | temperature | 30 | 4320 | < th | dose dependent | sin | 7 | NA |
| 219 | 149.16 | temperature | 10 | 4320 | > th | dose dependent | sin | 7 | NA |
| 266 | 149.34 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 281 | 149.38 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 320 | 149.50 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 340 | 149.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 393 | 149.66 | temperature | 30 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 401 | 149.68 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 14 |
| 441 | 149.77 | temperature | 25 | 43200 | > th | dose independent | rect. | 15 | 14 |
| 509 | 149.84 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 511 | 149.84 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 598 | 149.96 | temperature | 25 | 43200 | < th | dose independent | sin | 15 | NA |
| 601 | 149.96 | temperature | 20 | 43200 | > th | dose dependent | sin | 15 | NA |
| 648 | 149.99 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 19 |
| 712 | 150.06 | temperature | 25 | 43200 | > th | dose independent | sin | 15 | NA |
| 953 | 150.33 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 978 | 150.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 1 |