Os05g0588900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase, central region domain containing protein.
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Os05g0588900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase, central region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 309.41 | 0.826 | 7.91 | 2.3 | 2.91 | -1.6 | -1.42 | 1.38 | 0.106 | 8.3 | 20.51 | 270 | 21 | 19.1 |
| 316.67 | 0.829 | 7.93 | 2.08 | 2.92 | -1.6 | -0.889 | -- | 0.0926 | 8.32 | 20.53 | 272 | 21 | 19.2 |
| 314.89 | 0.826 | 7.92 | 2.18 | 2.94 | -1.62 | -- | 0.951 | 0.0931 | 8.29 | 20.55 | 271 | 21 | 19.1 |
| 318.51 | 0.831 | 7.94 | 2.03 | 2.95 | -1.66 | -- | -- | 0.0534 | 8.31 | 20.58 | 272 | 21 | 19.1 |
| 507.35 | 1.05 | 7.91 | 2.32 | -- | -2.39 | -- | 2.11 | 0.3 | -- | 19.3 | 1003 | 21.6 | 20 |
| 420.82 | 0.962 | 8.02 | 1.64 | 2.03 | -- | -0.835 | -- | -0.207 | 7.74 | -- | -- | -- | -- |
| 422.81 | 0.963 | 8.02 | 1.62 | 2.03 | -- | -- | -- | -0.206 | 7.73 | -- | -- | -- | -- |
| 392.5 | 0.923 | 7.82 | 2.16 | -- | -3.3 | -- | -- | 0.207 | -- | 19.5 | 724 | 5.08 | 16.7 |
| 421.72 | 0.956 | 7.99 | -- | 2.93 | -1.37 | -- | -- | -0.222 | 8.15 | 20.6 | 265 | 21.3 | 18.3 |
| 645.66 | 1.19 | 8.07 | 1.64 | -- | -- | -- | -- | -0.177 | -- | -- | -- | -- | -- |
| 491.65 | 1.04 | 8.06 | -- | 2.04 | -- | -- | -- | -0.386 | 7.67 | -- | -- | -- | -- |
| 483.41 | 1.02 | 8.1 | -- | -- | -2.38 | -- | -- | -0.257 | -- | 17.9 | 614 | 5.77 | 17 |
| 716.78 | 1.25 | 8.11 | -- | -- | -- | -- | -- | -0.359 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 316.25 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 19 |
| 2 | 319.81 | wind | 5 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 4 | 320.70 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 7 | 320.94 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 9 | 321.32 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 18 | 321.87 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 26 | 322.38 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 69 | 324.53 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 76 | 324.80 | wind | 3 | 43200 | < th | dose dependent | sin | 8 | NA |
| 80 | 324.90 | wind | 3 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 81 | 324.91 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 89 | 325.07 | wind | 3 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 97 | 325.34 | wind | 3 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 107 | 325.44 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 108 | 325.49 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 113 | 325.56 | wind | 3 | 43200 | < th | dose independent | sin | 6 | NA |
| 114 | 325.58 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 115 | 325.60 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 117 | 325.62 | wind | 3 | 43200 | < th | dose independent | sin | 9 | NA |
| 118 | 325.63 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 119 | 325.68 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 143 | 326.03 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 144 | 326.03 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 161 | 326.23 | wind | 3 | 43200 | > th | dose independent | sin | 10 | NA |
| 168 | 326.29 | wind | 3 | 43200 | > th | dose independent | sin | 6 | NA |
| 175 | 326.33 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 184 | 326.47 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 191 | 326.55 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 205 | 326.66 | wind | 3 | 43200 | > th | dose independent | rect. | 18 | 18 |
| 292 | 327.43 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 333 | 327.86 | wind | 1 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 359 | 328.06 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 410 | 328.56 | wind | 1 | 14400 | > th | dose dependent | rect. | 21 | 8 |
| 414 | 328.63 | wind | 1 | 43200 | > th | dose dependent | sin | 10 | NA |
| 618 | 330.48 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 681 | 331.04 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 738 | 331.37 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 799 | 331.75 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 16 |
| 877 | 332.44 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 935 | 332.85 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 989 | 333.23 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 6 |