Os05g0585600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0585600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.58 | 0.321 | 10.1 | 1.77 | 0.124 | -0.9 | -0.138 | 1.18 | 0.438 | 23.8 | 19.94 | 1542 | -- | -- |
| 47.82 | 0.322 | 10.2 | 1.56 | 0.124 | -0.918 | -0.0838 | -- | 0.35 | 0.386 | 19.15 | 4715 | -- | -- |
| 46.64 | 0.318 | 10.1 | 1.78 | 0.127 | -0.895 | -- | 1.18 | 0.439 | 0.492 | 20.02 | 1532 | -- | -- |
| 47.51 | 0.321 | 10.2 | 1.53 | 0.0858 | -0.879 | -- | -- | 0.357 | 0.529 | 21.2 | 5938 | -- | -- |
| 47.59 | 0.321 | 10.1 | 1.78 | -- | -0.903 | -- | 1.2 | 0.439 | -- | 20.07 | 1580 | -- | -- |
| 69.28 | 0.39 | 10.2 | 1.11 | 0.0974 | -- | -0.183 | -- | 0.142 | 23.2 | -- | -- | -- | -- |
| 69.38 | 0.39 | 10.2 | 1.11 | 0.102 | -- | -- | -- | 0.142 | 0.345 | -- | -- | -- | -- |
| 48.05 | 0.323 | 10.2 | 1.46 | -- | -0.787 | -- | -- | 0.32 | -- | 22.86 | 5966 | -- | -- |
| 92.5 | 0.448 | 10.2 | -- | 0.143 | -0.495 | -- | -- | -0.0409 | 23.6 | 28.3 | 4518 | -- | -- |
| 70.02 | 0.391 | 10.2 | 1.12 | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
| 101.99 | 0.472 | 10.2 | -- | 0.118 | -- | -- | -- | 0.0178 | 0.836 | -- | -- | -- | -- |
| 92.33 | 0.448 | 10.2 | -- | -- | -0.471 | -- | -- | -0.0248 | -- | 29.1 | 5944 | -- | -- |
| 102.86 | 0.473 | 10.2 | -- | -- | -- | -- | -- | 0.0196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 2 | 44.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 3 | 44.62 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 5 | 44.73 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 23 | 45.45 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 27 | 45.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 32 | 45.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 44 | 45.74 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 45 | 45.75 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 69 | 45.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 72 | 45.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 89 | 46.02 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 93 | 46.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 142 | 46.13 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 156 | 46.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 159 | 46.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 161 | 46.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 175 | 46.22 | temperature | 20 | 1440 | > th | dose dependent | sin | 22 | NA |
| 212 | 46.27 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 216 | 46.28 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 252 | 46.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 9 |
| 286 | 46.37 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 2 |
| 369 | 46.46 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 489 | 46.58 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 546 | 46.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 570 | 46.66 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 571 | 46.66 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 583 | 46.66 | temperature | 25 | 4320 | > th | dose dependent | sin | 4 | NA |
| 606 | 46.68 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 611 | 46.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 624 | 46.70 | temperature | 10 | 4320 | > th | dose dependent | sin | 23 | NA |
| 670 | 46.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 684 | 46.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 707 | 46.78 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 710 | 46.78 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 5 |
| 738 | 46.81 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 801 | 46.87 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 805 | 46.88 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 807 | 46.88 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 922 | 47.00 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 926 | 47.00 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 945 | 47.01 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 14 | 1 |