Os05g0584900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C4-dicarboxylate transporter/malic acid transport protein family protein.
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Os05g0584900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C4-dicarboxylate transporter/malic acid transport protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 199.85 | 0.664 | 2.93 | 0.147 | 0.216 | 0.705 | -0.0333 | -5.12 | -0.0808 | 12.6 | 9 | 272 | -- | -- |
| 200.09 | 0.659 | 2.95 | 0.218 | 0.207 | 1.86 | -0.0558 | -- | -0.0851 | 12.6 | 8.143 | 282 | -- | -- |
| 199.86 | 0.658 | 2.93 | 0.147 | 0.218 | 0.644 | -- | -5.37 | -0.079 | 12.6 | 9.01 | 282 | -- | -- |
| 200.08 | 0.659 | 2.95 | 0.222 | 0.212 | 1.89 | -- | -- | -0.0714 | 12.4 | 8.153 | 282 | -- | -- |
| 202.77 | 0.663 | 2.93 | 0.142 | -- | 0.738 | -- | -5.28 | -0.0829 | -- | 9.04 | 271 | -- | -- |
| 213.01 | 0.684 | 2.96 | 0.0528 | 0.262 | -- | -0.226 | -- | -0.137 | 13.7 | -- | -- | -- | -- |
| 213.22 | 0.684 | 2.96 | 0.0455 | 0.262 | -- | -- | -- | -0.138 | 13.7 | -- | -- | -- | -- |
| 202.9 | 0.663 | 2.95 | 0.221 | -- | 1.95 | -- | -- | -0.0724 | -- | 8.164 | 282 | -- | -- |
| 201.31 | 0.661 | 2.95 | -- | 0.213 | 1.74 | -- | -- | -0.0999 | 12.5 | 8.102 | 282 | -- | -- |
| 217.39 | 0.689 | 2.97 | 0.0349 | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
| 213.27 | 0.683 | 2.97 | -- | 0.261 | -- | -- | -- | -0.143 | 13.7 | -- | -- | -- | -- |
| 204.12 | 0.665 | 2.96 | -- | -- | 1.81 | -- | -- | -0.101 | -- | 8.154 | 282 | -- | -- |
| 217.42 | 0.688 | 2.97 | -- | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.58 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 9 | 191.58 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 26 | 194.43 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 46 | 196.61 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 9 |
| 58 | 196.71 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 21 |
| 94 | 197.92 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 9 |
| 108 | 198.26 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 23 |
| 110 | 198.37 | wind | 9 | 90 | > th | dose dependent | sin | 18 | NA |
| 119 | 198.54 | wind | 9 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 195 | 199.16 | wind | 9 | 270 | > th | dose independent | rect. | 11 | 12 |
| 272 | 199.54 | wind | 9 | 270 | > th | dose independent | sin | 22 | NA |
| 333 | 199.73 | wind | 9 | 90 | < th | dose independent | sin | 18 | NA |
| 373 | 199.90 | wind | 9 | 270 | < th | dose independent | sin | 23 | NA |
| 427 | 200.00 | wind | 9 | 90 | > th | dose independent | sin | 18 | NA |
| 438 | 200.02 | wind | 9 | 270 | > th | dose independent | no | NA | NA |
| 618 | 200.43 | wind | 9 | 270 | < th | dose independent | no | NA | NA |
| 702 | 200.55 | wind | 7 | 270 | > th | dose dependent | no | NA | NA |
| 905 | 200.87 | wind | 7 | 270 | < th | dose independent | rect. | 12 | 23 |