Os05g0583600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0583600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.16 | 0.475 | 2.93 | -0.295 | 0.0281 | 0.89 | -0.437 | -3.3 | -0.0186 | 12.7 | 94.43 | 79 | -- | -- |
| 107.89 | 0.484 | 2.92 | -0.293 | 0.027 | 1.01 | -0.244 | -- | -0.0322 | 12.2 | 94.71 | 69 | -- | -- |
| 102.83 | 0.472 | 2.93 | -0.308 | 0.0631 | 0.839 | -- | -3.26 | -0.0491 | 8.89 | 94.54 | 79 | -- | -- |
| 107.99 | 0.484 | 2.92 | -0.3 | 0.0606 | 1 | -- | -- | -0.0348 | 8.21 | 94.74 | 67 | -- | -- |
| 102.98 | 0.473 | 2.93 | -0.308 | -- | 0.907 | -- | -3.12 | -0.0233 | -- | 94.49 | 82 | -- | -- |
| 112.15 | 0.496 | 2.93 | -0.277 | 0.163 | -- | -0.371 | -- | -0.0796 | 6.55 | -- | -- | -- | -- |
| 112.44 | 0.497 | 2.93 | -0.284 | 0.165 | -- | -- | -- | -0.079 | 5.85 | -- | -- | -- | -- |
| 108.17 | 0.484 | 2.92 | -0.302 | -- | 1.03 | -- | -- | -0.0342 | -- | 94.73 | 67 | -- | -- |
| 110.3 | 0.489 | 2.91 | -- | 0.0651 | 1.04 | -- | -- | -0.00773 | 7.96 | 94.81 | 67 | -- | -- |
| 113.85 | 0.499 | 2.93 | -0.279 | -- | -- | -- | -- | -0.0751 | -- | -- | -- | -- | -- |
| 114.56 | 0.501 | 2.92 | -- | 0.16 | -- | -- | -- | -0.0474 | 5.94 | -- | -- | -- | -- |
| 110.52 | 0.49 | 2.91 | -- | -- | 1.06 | -- | -- | -0.005 | -- | 94.79 | 67 | -- | -- |
| 115.9 | 0.502 | 2.92 | -- | -- | -- | -- | -- | -0.0442 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.35 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 99.27 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 3 | 99.27 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 6 | 100.25 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 7 | 100.25 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 8 | 100.57 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 9 | 100.80 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 12 | 100.89 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 13 | 101.12 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 14 | 101.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 15 | 101.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 16 | 101.19 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 23 | 101.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 24 | 101.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 33 | 101.53 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 41 | 101.67 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 56 | 101.94 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 61 | 102.17 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 67 | 102.24 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 71 | 102.25 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 77 | 102.27 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 89 | 102.41 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 91 | 102.41 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 93 | 102.41 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 144 | 102.41 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 146 | 102.41 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 148 | 102.41 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 201 | 102.45 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 212 | 102.45 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 225 | 102.53 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 251 | 102.95 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 274 | 103.33 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 277 | 103.36 | humidity | 90.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 283 | 103.45 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 288 | 103.45 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 294 | 103.48 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 299 | 103.51 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 320 | 103.66 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 330 | 103.76 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 331 | 103.78 | wind | 3.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 341 | 103.86 | wind | 3.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 346 | 103.89 | wind | 5.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 347 | 103.89 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 348 | 103.89 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 359 | 103.95 | wind | 7.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 373 | 104.01 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 377 | 104.04 | wind | 7.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 382 | 104.06 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 390 | 104.12 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 397 | 104.16 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 5 |
| 404 | 104.27 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 405 | 104.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 407 | 104.28 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 412 | 104.30 | wind | 3.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 413 | 104.32 | wind | 5.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 415 | 104.32 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 428 | 104.38 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 429 | 104.39 | wind | 7.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 444 | 104.49 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 453 | 104.55 | wind | 7.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 473 | 104.66 | wind | 3.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 484 | 104.71 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 3 |
| 485 | 104.72 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 491 | 104.73 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 498 | 104.78 | wind | 7.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 517 | 104.83 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 559 | 104.91 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 562 | 104.91 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 569 | 104.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 708 | 105.22 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 800 | 105.37 | wind | 3.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 818 | 105.41 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 852 | 105.45 | wind | 3.0 | 4320 | > th | dose independent | rect. | 15 | 11 |
| 925 | 105.54 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 9 |