Os05g0583100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAT dimerisation domain containing protein.
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Os05g0583100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAT dimerisation domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.42 | 0.268 | 11.8 | 1.09 | 0.292 | 0.74 | 0.0637 | 0.0993 | 0.34 | 19.5 | 80.29 | 1407 | -- | -- |
| 32.38 | 0.265 | 11.8 | 1.1 | 0.29 | 0.738 | 0.0367 | -- | 0.343 | 19.8 | 80.05 | 1363 | -- | -- |
| 32.35 | 0.265 | 11.8 | 1.08 | 0.292 | 0.728 | -- | 0.21 | 0.337 | 19.9 | 80.09 | 1356 | -- | -- |
| 32.39 | 0.265 | 11.8 | 1.1 | 0.291 | 0.738 | -- | -- | 0.341 | 19.9 | 80.06 | 1357 | -- | -- |
| 36.91 | 0.283 | 11.8 | 1.08 | -- | 0.768 | -- | 0.165 | 0.337 | -- | 80.36 | 1377 | -- | -- |
| 39.33 | 0.294 | 11.8 | 1.08 | 0.317 | -- | 0.128 | -- | 0.296 | 19.2 | -- | -- | -- | -- |
| 39.37 | 0.294 | 11.8 | 1.08 | 0.317 | -- | -- | -- | 0.296 | 19.3 | -- | -- | -- | -- |
| 36.93 | 0.283 | 11.8 | 1.09 | -- | 0.778 | -- | -- | 0.34 | -- | 80.19 | 1379 | -- | -- |
| 61.1 | 0.364 | 11.8 | -- | 0.484 | 0.761 | -- | -- | 0.267 | 19.5 | 83.22 | 2032 | -- | -- |
| 44.69 | 0.312 | 11.8 | 1.07 | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
| 70.11 | 0.392 | 11.8 | -- | 0.307 | -- | -- | -- | 0.176 | 19.6 | -- | -- | -- | -- |
| 66.08 | 0.379 | 11.8 | -- | -- | 0.584 | -- | -- | 0.25 | -- | 86.02 | 1450 | -- | -- |
| 75.15 | 0.405 | 11.8 | -- | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.95 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 2 | 32.03 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 5 | 32.11 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 10 | 32.18 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 19 | 32.25 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 40 | 32.36 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 54 | 32.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 61 | 32.42 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 62 | 32.42 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 68 | 32.46 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 70 | 32.46 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 76 | 32.48 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 79 | 32.49 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 84 | 32.50 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 98 | 32.52 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 110 | 32.53 | humidity | 50 | 1440 | > th | dose dependent | sin | 13 | NA |
| 111 | 32.53 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 116 | 32.54 | humidity | 80 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 142 | 32.57 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 245 | 32.68 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 414 | 32.87 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 427 | 32.88 | humidity | 90 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 453 | 32.91 | humidity | 70 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 455 | 32.91 | humidity | 70 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 506 | 32.96 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 511 | 32.97 | humidity | 90 | 1440 | < th | dose dependent | sin | 12 | NA |
| 549 | 33.00 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 597 | 33.04 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 10 |
| 690 | 33.12 | humidity | 80 | 1440 | > th | dose independent | sin | 19 | NA |
| 692 | 33.12 | humidity | 90 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 746 | 33.16 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 14 |
| 803 | 33.21 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 816 | 33.22 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 5 |
| 849 | 33.24 | humidity | 80 | 1440 | < th | dose independent | sin | 21 | NA |
| 860 | 33.24 | humidity | 90 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 895 | 33.27 | humidity | 90 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 941 | 33.31 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |