Os05g0582800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S10, serine carboxypeptidase family protein.
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Os05g0582800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S10, serine carboxypeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.81 | 0.348 | 11.6 | 0.625 | 0.42 | -0.882 | 1.44 | 0.115 | -0.183 | 5.74 | 13.36 | 10 | -- | -- |
| 54.07 | 0.345 | 11.6 | 0.618 | 0.392 | -0.904 | 1.41 | -- | -0.175 | 5.47 | 13.36 | 10 | -- | -- |
| 58.9 | 0.36 | 11.6 | 0.626 | 0.401 | -0.855 | -- | 0.0864 | -0.18 | 6.04 | 13.36 | 10 | -- | -- |
| 58.94 | 0.36 | 11.6 | 0.624 | 0.401 | -0.853 | -- | -- | -0.181 | 6.06 | 13.36 | 10 | -- | -- |
| 67.18 | 0.384 | 11.6 | 0.638 | -- | -0.874 | -- | 0.113 | -0.171 | -- | 13.36 | 10 | -- | -- |
| 71.42 | 0.396 | 11.6 | 0.63 | 1.04 | -- | 0.246 | -- | -0.166 | 10.2 | -- | -- | -- | -- |
| 71.65 | 0.396 | 11.6 | 0.641 | 1.04 | -- | -- | -- | -0.165 | 10.2 | -- | -- | -- | -- |
| 67.25 | 0.384 | 11.6 | 0.635 | -- | -0.873 | -- | -- | -0.172 | -- | 13.36 | 10 | -- | -- |
| 69.19 | 0.39 | 11.6 | -- | 0.41 | -0.872 | -- | -- | -0.25 | 5.79 | 13.36 | 10 | -- | -- |
| 137 | 0.547 | 11.6 | 0.625 | -- | -- | -- | -- | -0.167 | -- | -- | -- | -- | -- |
| 82.47 | 0.425 | 11.6 | -- | 1.03 | -- | -- | -- | -0.236 | 10.2 | -- | -- | -- | -- |
| 77.9 | 0.412 | 11.6 | -- | -- | -0.871 | -- | -- | -0.242 | -- | 13.36 | 10 | -- | -- |
| 147.32 | 0.567 | 11.6 | -- | -- | -- | -- | -- | -0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.91 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 4 | 53.26 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 5 | 53.29 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 9 | 54.15 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 10 | 54.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 19 | 54.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 27 | 54.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 28 | 54.87 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 32 | 55.00 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 14 |
| 33 | 55.01 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 41 | 55.18 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 45 | 55.31 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 54 | 55.58 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 59 | 55.61 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 63 | 55.66 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 66 | 55.69 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 67 | 55.70 | radiation | 10.0 | 10 | < th | dose dependent | no | NA | NA |
| 72 | 55.77 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 77 | 55.86 | radiation | 1.0 | 30 | > th | dose independent | sin | 1 | NA |
| 97 | 56.07 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 103 | 56.10 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 11 |
| 146 | 56.28 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 149 | 56.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 156 | 56.48 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 166 | 56.59 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 167 | 56.59 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 16 |
| 176 | 56.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 10 |
| 177 | 56.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 10 |
| 180 | 56.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 14 |
| 181 | 56.70 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 186 | 56.75 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 194 | 56.83 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 18 |
| 197 | 56.85 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 14 |
| 232 | 56.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 233 | 56.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 234 | 56.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 10 |
| 243 | 57.00 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 280 | 57.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 10 |
| 285 | 57.22 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 303 | 57.33 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 1 | 10 |
| 314 | 57.39 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 339 | 57.49 | temperature | 25.0 | 90 | < th | dose independent | rect. | 24 | 9 |
| 347 | 57.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 358 | 57.58 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 381 | 57.66 | radiation | 10.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 387 | 57.67 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 396 | 57.70 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 397 | 57.70 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 399 | 57.71 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 412 | 57.76 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 18 |
| 431 | 57.83 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 442 | 57.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 458 | 57.88 | temperature | 15.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 460 | 57.89 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 489 | 58.00 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 21 |
| 490 | 58.00 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 18 |
| 494 | 58.01 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 510 | 58.04 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 511 | 58.05 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 531 | 58.10 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 581 | 58.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 20 |
| 607 | 58.29 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 619 | 58.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 22 |
| 623 | 58.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 624 | 58.34 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 636 | 58.37 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 687 | 58.48 | temperature | 25.0 | 30 | < th | dose independent | sin | 7 | NA |
| 688 | 58.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 20 |
| 692 | 58.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 711 | 58.55 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 748 | 58.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 20 |
| 754 | 58.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 20 |
| 778 | 58.68 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 9 |
| 803 | 58.73 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 808 | 58.73 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 813 | 58.74 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 21 |
| 821 | 58.75 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 826 | 58.75 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 831 | 58.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 20 |
| 832 | 58.75 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 841 | 58.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 853 | 58.77 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 861 | 58.78 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 881 | 58.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 23 |
| 887 | 58.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 897 | 58.85 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 12 |
| 898 | 58.85 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 920 | 58.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 4 |
| 921 | 58.90 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 923 | 58.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 947 | 58.93 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 948 | 58.94 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 956 | 58.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 996 | 58.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 15 |
| 997 | 58.99 | temperature | 25.0 | 30 | < th | dose independent | rect. | 24 | 16 |
| 998 | 58.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 15 |