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Os05g0581000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.54 (0.0226) R2 : 0.259
β1 : 1.03 (0.083) R2dD : 0.26 R2D : 0.258
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.011 (0.0484) R2dN8 : 0.000112 R2N8 : -0.00172
σ : 0.425
deviance : 82.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.63 0.36 9.45 1.5 0.138 0.596 0.225 -0.934 0.369 11.4 24.6 348 -- --
61.84 0.366 9.47 1.21 0.0362 0.623 0.275 -- 0.322 9.93 24.6 487 -- --
58.8 0.357 9.45 1.52 0.145 0.599 -- -0.946 0.368 12.2 24.53 344 -- --
61.72 0.366 9.47 1.24 0.12 0.591 -- -- 0.305 13.4 24.59 357 -- --
59.35 0.359 9.44 1.56 -- 0.66 -- -1.04 0.382 -- 24.55 484 -- --
77.44 0.413 9.53 1.02 0.313 -- 0.193 -- 0.00644 7.54 -- -- -- --
77.53 0.412 9.53 1.03 0.314 -- -- -- 0.00592 7.43 -- -- -- --
62 0.367 9.48 1.22 -- 0.591 -- -- 0.268 -- 24.5 488 -- --
99.74 0.465 9.52 -- 0.014 0.479 -- -- 0.0834 12 24.9 485 -- --
82.78 0.425 9.54 1.03 -- -- -- -- 0.011 -- -- -- -- --
105.24 0.48 9.56 -- 0.324 -- -- -- -0.108 7.22 -- -- -- --
99.66 0.465 9.53 -- -- 0.435 -- -- 0.0691 -- 24.8 484 -- --
110.79 0.491 9.57 -- -- -- -- -- -0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.92 humidity 80 43200 > th dose independent rect. 17 2
3 59.06 humidity 80 43200 < th dose independent rect. 17 1
5 59.26 temperature 25 1440 < th dose independent rect. 16 14
7 59.33 temperature 25 1440 < th dose independent rect. 16 11
9 59.40 temperature 25 720 < th dose independent rect. 17 18
13 59.44 wind 9 43200 > th dose dependent rect. 18 3
14 59.45 temperature 25 1440 > th dose independent rect. 16 14
16 59.49 temperature 25 720 > th dose independent rect. 17 18
17 59.52 temperature 25 1440 > th dose independent rect. 16 11
24 59.58 temperature 30 30 < th dose dependent rect. 3 23
27 59.66 temperature 25 1440 < th dose independent sin 12 NA
28 59.67 temperature 25 720 > th dose independent sin 10 NA
32 59.69 temperature 25 1440 > th dose independent sin 12 NA
33 59.69 wind 9 43200 > th dose independent rect. 18 3
34 59.70 temperature 25 720 > th dose independent rect. 19 16
42 59.75 temperature 25 720 < th dose independent sin 10 NA
46 59.76 temperature 20 270 > th dose dependent sin 10 NA
57 59.84 humidity 80 43200 > th dose dependent rect. 18 2
63 59.89 wind 9 43200 < th dose independent rect. 18 3
89 60.03 temperature 20 720 > th dose dependent rect. 15 17
97 60.09 temperature 25 1440 < th dose independent rect. 19 8
105 60.15 wind 9 43200 > th dose dependent rect. 18 7
112 60.20 wind 9 43200 > th dose dependent rect. 18 9
113 60.21 atmosphere 1005 43200 > th dose independent rect. 1 1
114 60.21 atmosphere 1005 43200 < th dose independent rect. 1 2
116 60.21 temperature 20 720 > th dose dependent sin 12 NA
154 60.41 atmosphere 1005 43200 > th dose independent rect. 22 5
179 60.51 atmosphere 1005 43200 > th dose independent rect. 22 1
192 60.57 temperature 15 10 > th dose dependent rect. 13 23
211 60.62 atmosphere 1005 43200 > th dose independent rect. 11 1
215 60.63 humidity 90 43200 > th dose independent rect. 5 2
272 60.74 temperature 15 270 > th dose dependent rect. 13 23
280 60.77 atmosphere 1005 43200 > th dose independent rect. 4 1
297 60.80 atmosphere 1005 43200 < th dose independent rect. 11 1
327 60.86 atmosphere 1005 43200 > th dose independent rect. 22 15
329 60.86 temperature 30 270 < th dose dependent rect. 11 22
343 60.89 atmosphere 1005 43200 > th dose independent sin 8 NA
364 60.91 atmosphere 1005 43200 < th dose independent rect. 22 15
368 60.92 atmosphere 1005 43200 < th dose independent sin 8 NA
383 60.93 temperature 10 720 > th dose dependent rect. 15 16
409 60.96 temperature 20 1440 > th dose dependent rect. 24 1
410 60.96 temperature 20 1440 > th dose dependent rect. 24 3
449 61.00 temperature 30 720 < th dose dependent rect. 16 15
461 61.01 atmosphere 1010 43200 < th dose dependent rect. 6 1
507 61.06 humidity 90 43200 < th dose independent rect. 22 1
523 61.07 temperature 20 1440 > th dose dependent rect. 23 6
557 61.10 wind 9 43200 > th dose independent rect. 18 7
617 61.16 humidity 90 43200 < th dose independent rect. 19 2
638 61.17 temperature 25 720 < th dose independent rect. 10 22
657 61.19 wind 9 43200 > th dose independent rect. 18 9
784 61.27 atmosphere 1005 43200 < th dose independent rect. 11 22
791 61.28 atmosphere 1005 43200 < th dose independent no NA NA
807 61.28 atmosphere 1005 43200 < th dose independent rect. 6 23
853 61.30 atmosphere 1010 43200 < th dose dependent rect. 4 9
881 61.31 temperature 30 720 < th dose dependent sin 12 NA
893 61.32 atmosphere 1005 43200 > th dose independent no NA NA
908 61.32 atmosphere 1005 43200 > th dose independent rect. 11 22
911 61.32 atmosphere 1005 43200 > th dose independent rect. 6 23
912 61.32 atmosphere 1005 43200 > th dose independent rect. 8 23
953 61.33 atmosphere 1005 43200 > th dose independent rect. 24 23
980 61.34 atmosphere 1005 43200 > th dose independent rect. 4 23