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Os05g0579300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ZF-HD homeobox protein Cys/His-rich dimerisation region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0334) R2 : 0.488
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.82 (0.0925) R2dE : 0.435 R2E : 0.436
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.421 (0.0703) R2dN8 : 0.0521 R2N8 : 0.0523
σ : 0.627
deviance : 181.13
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C
peak time of C : --
E
wheather : atmosphere
threshold : 1002
memory length : 437
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 9.32
open length of G : 6.29

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
140.74 0.557 11.2 -0.634 1.76 -0.812 2.43 0.632 -0.539 5.7 1001 30 1.2 17.4
142.85 0.557 11.2 -0.631 1.77 -0.831 2.7 -- -0.536 5.81 1001 30 1.23 17.3
154.45 0.579 11.2 -0.626 1.77 -0.808 -- 0.987 -0.555 5.68 1001 30 1.17 17.4
160.18 0.589 11.2 -0.611 1.77 -0.774 -- -- -0.555 5.59 1001 26 1.2 17.4
224.39 0.698 11.2 -0.531 -- -1.47 -- 0.83 -0.212 -- 1002 644 3.19 15.8
184.88 0.637 11.2 -0.525 1.57 -- 1.8 -- -0.568 4.33 -- -- -- --
193.01 0.651 11.2 -0.542 1.58 -- -- -- -0.578 4.05 -- -- -- --
172.85 0.612 11.2 -0.544 -- -1.79 -- -- -0.492 -- 1002 447 9.29 6
169.95 0.607 11.2 -- 1.75 -0.749 -- -- -0.488 5.56 1001 24 1.17 17.4
328.74 0.847 11.2 -0.478 -- -- -- -- -0.536 -- -- -- -- --
200.76 0.663 11.2 -- 1.57 -- -- -- -0.518 4.06 -- -- -- --
181.13 0.627 11.2 -- -- -1.82 -- -- -0.421 -- 1002 437 9.32 6.29
334.77 0.854 11.2 -- -- -- -- -- -0.483 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 143.28 atmosphere 1000.0 30 > th dose independent rect. 1 17
7 145.00 humidity 50.0 30 > th dose dependent rect. 1 16
13 145.88 atmosphere 995.0 270 > th dose dependent rect. 11 6
15 146.28 radiation 1.0 30 < th dose dependent rect. 16 9
17 146.58 temperature 10.0 270 > th dose dependent rect. 19 16
19 147.09 wind 1.0 270 > th dose independent rect. 16 8
21 147.34 temperature 30.0 10 < th dose dependent rect. 1 16
26 147.57 precipitation 0.1 270 < th dose independent rect. 15 9
27 147.57 precipitation 0.1 270 < th dose dependent rect. 15 9
36 148.08 temperature 10.0 270 > th dose dependent rect. 3 9
40 148.45 radiation 1.0 30 < th dose independent rect. 17 8
43 148.51 radiation 20.0 90 < th dose dependent rect. 17 8
47 148.66 humidity 60.0 10 > th dose independent rect. 18 7
51 148.72 radiation 1.0 1440 < th dose dependent rect. 19 7
63 149.04 temperature 30.0 10 < th dose independent rect. 18 7
66 149.09 wind 9.0 90 < th dose independent rect. 17 8
70 149.23 wind 9.0 270 < th dose independent rect. 15 9
71 149.26 temperature 10.0 270 > th dose independent rect. 15 9
72 149.26 temperature 10.0 270 > th dose independent rect. 24 15
73 149.26 atmosphere 1015.0 270 < th dose independent rect. 24 15
77 149.28 temperature 10.0 90 > th dose independent rect. 17 8
78 149.28 radiation 20.0 90 < th dose independent rect. 17 8
93 149.40 wind 9.0 270 < th dose independent rect. 24 15
95 149.41 radiation 40.0 10 < th dose dependent rect. 1 16
96 149.42 atmosphere 1000.0 270 > th dose independent rect. 10 7
115 149.63 temperature 25.0 90 < th dose independent rect. 24 16
119 149.70 wind 7.0 270 < th dose independent rect. 18 16
129 149.83 atmosphere 1000.0 270 > th dose independent rect. 11 4
130 149.84 temperature 10.0 1440 > th dose independent rect. 19 7
133 149.84 temperature 30.0 1440 < th dose independent rect. 19 7
137 149.84 humidity 50.0 1440 > th dose independent rect. 19 7
139 149.84 atmosphere 995.0 1440 > th dose independent rect. 19 7
140 149.84 radiation 1.0 1440 < th dose independent rect. 19 7
160 149.84 temperature 10.0 1440 > th dose independent rect. 2 17
169 149.88 precipitation 0.1 270 < th dose independent rect. 17 17
170 149.88 precipitation 0.1 270 < th dose dependent rect. 17 17
174 149.94 radiation 40.0 43200 < th dose dependent rect. 19 7
179 149.98 wind 1.0 10 > th dose independent rect. 18 7
192 150.06 atmosphere 995.0 90 > th dose independent rect. 17 8
223 150.31 radiation 40.0 270 < th dose dependent rect. 15 9
264 150.56 precipitation 0.1 90 < th dose independent rect. 1 16
266 150.56 precipitation 0.1 90 < th dose dependent rect. 1 16
421 151.50 humidity 90.0 90 < th dose independent rect. 18 18
430 151.55 temperature 15.0 10 > th dose dependent rect. 22 14
453 151.74 temperature 25.0 90 < th dose independent rect. 24 11
464 151.86 temperature 25.0 90 < th dose independent rect. 24 9
587 152.46 radiation 40.0 30 < th dose independent rect. 1 16
595 152.49 humidity 50.0 270 > th dose independent rect. 24 16
597 152.49 wind 9.0 90 < th dose dependent rect. 17 7
628 152.58 humidity 60.0 30 > th dose independent rect. 1 16
643 152.64 atmosphere 1000.0 30 > th dose independent rect. 3 15
645 152.65 temperature 10.0 270 > th dose independent rect. 10 7
646 152.65 atmosphere 1015.0 270 < th dose independent rect. 10 7
648 152.65 temperature 10.0 270 > th dose independent rect. 17 17
652 152.68 atmosphere 1015.0 30 < th dose independent rect. 18 7
676 152.80 humidity 50.0 270 > th dose independent rect. 17 17
686 152.84 precipitation 0.1 270 < th dose independent rect. 10 7
687 152.84 precipitation 0.1 270 < th dose dependent rect. 10 7
691 152.86 wind 1.0 270 > th dose independent rect. 17 17
723 152.96 wind 9.0 270 < th dose independent rect. 10 7
730 152.99 temperature 10.0 30 > th dose dependent sin 6 NA
748 153.09 temperature 30.0 90 < th dose dependent rect. 24 11
762 153.21 wind 1.0 270 > th dose independent rect. 10 7
770 153.24 humidity 50.0 10 > th dose dependent rect. 18 7
781 153.31 radiation 40.0 10 < th dose dependent rect. 1 14
799 153.38 temperature 30.0 30 < th dose dependent rect. 1 9
821 153.49 atmosphere 995.0 10 > th dose dependent rect. 12 6
856 153.63 temperature 20.0 270 > th dose independent rect. 5 7
896 153.89 wind 1.0 270 > th dose independent rect. 15 20
902 153.91 atmosphere 995.0 270 > th dose independent rect. 18 16
956 154.14 atmosphere 1000.0 30 > th dose independent rect. 12 20
985 154.28 humidity 90.0 270 < th dose independent rect. 17 7