Os05g0577800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0577800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.45 | 0.255 | 8.26 | 0.0371 | 0.49 | -1.43 | -0.0787 | -0.315 | -0.00606 | 20.9 | 28.02 | 170 | -- | -- |
| 29.57 | 0.253 | 8.27 | -0.0159 | 0.493 | -1.43 | -0.111 | -- | -0.0189 | 21 | 28.3 | 161 | -- | -- |
| 29.47 | 0.253 | 8.26 | 0.0413 | 0.495 | -1.43 | -- | -0.32 | -0.00483 | 20.9 | 28.1 | 164 | -- | -- |
| 29.61 | 0.253 | 8.27 | -0.0151 | 0.493 | -1.42 | -- | -- | -0.0183 | 21 | 28.22 | 164 | -- | -- |
| 38.49 | 0.289 | 8.27 | 0.00583 | -- | -1.64 | -- | -0.22 | -0.0706 | -- | 28.8 | 365 | -- | -- |
| 57.25 | 0.355 | 8.2 | 0.352 | 0.692 | -- | 0.2 | -- | 0.283 | 18.4 | -- | -- | -- | -- |
| 57.35 | 0.355 | 8.2 | 0.349 | 0.693 | -- | -- | -- | 0.283 | 18.5 | -- | -- | -- | -- |
| 38.38 | 0.289 | 8.26 | -0.0602 | -- | -1.59 | -- | -- | -0.0588 | -- | 28.88 | 387 | -- | -- |
| 29.61 | 0.253 | 8.26 | -- | 0.494 | -1.41 | -- | -- | -0.015 | 20.9 | 28.21 | 164 | -- | -- |
| 82.33 | 0.424 | 8.19 | 0.332 | -- | -- | -- | -- | 0.269 | -- | -- | -- | -- | -- |
| 60.57 | 0.364 | 8.21 | -- | 0.689 | -- | -- | -- | 0.244 | 18.5 | -- | -- | -- | -- |
| 38.46 | 0.289 | 8.26 | -- | -- | -1.57 | -- | -- | -0.049 | -- | 28.89 | 381 | -- | -- |
| 85.24 | 0.431 | 8.19 | -- | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 2 | 30.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 4 | 30.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 5 | 30.64 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 6 | 30.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 7 | 30.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 8 | 30.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 11 | 30.97 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 20 | 31.22 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 23 | 31.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 35 | 31.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 78 | 33.09 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 84 | 33.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 97 | 33.26 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 111 | 33.47 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 119 | 33.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 124 | 33.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 132 | 33.74 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 134 | 33.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 144 | 33.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 233 | 34.35 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 268 | 34.48 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |
| 271 | 34.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 278 | 34.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 15 |
| 493 | 34.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 606 | 35.24 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 835 | 35.76 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 17 |
| 877 | 35.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 23 |