Os05g0577700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein kinase.
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Os05g0577700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein kinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.37 | 0.456 | 11 | 1.37 | 2.09 | 1.03 | 0.566 | -0.052 | 0.831 | 21 | 66.77 | 6 | -- | -- |
| 93.86 | 0.455 | 11 | 1.37 | 2.08 | 1.03 | 0.546 | -- | 0.837 | 21 | 67 | 4 | -- | -- |
| 94.77 | 0.457 | 11 | 1.34 | 2.08 | 1.01 | -- | 0.174 | 0.833 | 21.1 | 66.98 | 3 | -- | -- |
| 94.88 | 0.457 | 11 | 1.35 | 2.08 | 1.02 | -- | -- | 0.835 | 21.1 | 67 | 2 | -- | -- |
| 332.17 | 0.853 | 11 | 1.33 | -- | 1.5 | -- | 0.0237 | 0.833 | -- | 64 | 2 | -- | -- |
| 117.77 | 0.509 | 11.1 | 1.37 | 2.36 | -- | 0.402 | -- | 0.742 | 22.4 | -- | -- | -- | -- |
| 118.43 | 0.51 | 11.1 | 1.35 | 2.36 | -- | -- | -- | 0.741 | 22.4 | -- | -- | -- | -- |
| 332.18 | 0.853 | 11 | 1.33 | -- | 1.5 | -- | -- | 0.833 | -- | 64 | 2 | -- | -- |
| 142.7 | 0.559 | 11.1 | -- | 2.08 | 1.02 | -- | -- | 0.685 | 21.1 | 66.98 | 2 | -- | -- |
| 458.46 | 1 | 11 | 1.39 | -- | -- | -- | -- | 0.749 | -- | -- | -- | -- | -- |
| 166.39 | 0.603 | 11.1 | -- | 2.37 | -- | -- | -- | 0.59 | 22.4 | -- | -- | -- | -- |
| 379.02 | 0.91 | 11 | -- | -- | 1.53 | -- | -- | 0.687 | -- | 64 | 2 | -- | -- |
| 509.24 | 1.05 | 11 | -- | -- | -- | -- | -- | 0.595 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.01 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 2 | 86.21 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 3 | 87.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 5 |
| 7 | 87.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 8 | 87.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 9 | 87.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 5 |
| 10 | 87.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 11 | 87.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 12 | 87.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 16 | 87.98 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 17 | 88.23 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 18 | 88.28 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 26 | 88.95 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 36 | 89.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 53 | 89.77 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 54 | 89.77 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 10 |
| 60 | 89.93 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 91 | 90.41 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 114 | 90.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 138 | 91.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 139 | 91.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 143 | 91.37 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 145 | 91.38 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 152 | 91.54 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 154 | 91.54 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 7 |
| 158 | 91.55 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 164 | 91.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 179 | 91.91 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 185 | 91.94 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 198 | 92.19 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 200 | 92.23 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 201 | 92.24 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 203 | 92.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 206 | 92.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 222 | 92.41 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 236 | 92.55 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 238 | 92.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 246 | 92.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 247 | 92.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 249 | 92.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 257 | 92.74 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 261 | 92.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 263 | 92.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 308 | 93.14 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 313 | 93.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 322 | 93.24 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 323 | 93.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 329 | 93.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 333 | 93.38 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 344 | 93.46 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 346 | 93.46 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 347 | 93.48 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 348 | 93.51 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 375 | 93.67 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 378 | 93.72 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 379 | 93.72 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 381 | 93.72 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 402 | 93.84 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 452 | 94.04 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 453 | 94.04 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 454 | 94.05 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 466 | 94.08 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 497 | 94.21 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 512 | 94.23 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 22 |
| 531 | 94.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 562 | 94.41 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 19 |
| 581 | 94.49 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 593 | 94.53 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 607 | 94.59 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 616 | 94.64 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 630 | 94.72 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 22 |
| 631 | 94.72 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 22 |
| 634 | 94.74 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 22 |
| 658 | 94.84 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 666 | 94.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 668 | 94.87 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 19 |
| 670 | 94.88 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 674 | 94.90 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 680 | 94.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 690 | 94.94 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 19 |
| 692 | 94.94 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 19 |
| 694 | 94.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 696 | 94.96 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 1 | 14 |
| 705 | 94.99 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 712 | 94.99 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 719 | 95.02 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 754 | 95.08 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 799 | 95.18 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 811 | 95.20 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 812 | 95.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 834 | 95.25 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 842 | 95.28 | humidity | 70.0 | 10 | > th | dose dependent | no | NA | NA |
| 856 | 95.32 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 862 | 95.35 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 866 | 95.36 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 9 |
| 884 | 95.42 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 899 | 95.45 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 922 | 95.49 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 930 | 95.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 16 |
| 931 | 95.50 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 967 | 95.56 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 973 | 95.57 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 14 |
| 982 | 95.59 | humidity | 80.0 | 10 | > th | dose dependent | sin | 23 | NA |