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Os05g0575400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.83 (0.0254) R2 : 0.000122
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0126 (0.0535) R2dN8 : 0.000158 R2N8 : 0.000122
σ : 0.478
deviance : 105.04
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.05 0.396 6.78 0.743 0.549 -0.272 -0.689 -1.58 0.0956 14 19.91 309 -- --
75.8 0.406 6.8 0.615 0.605 0.413 -0.354 -- 0.0863 14.1 18.4 385 -- --
72.18 0.396 6.78 0.746 0.563 -0.225 -- -1.5 0.0989 14.1 20.07 477 -- --
76.33 0.407 6.81 0.653 0.575 0.484 -- -- 0.0976 14.5 18.4 462 -- --
91.26 0.445 6.79 0.709 -- -0.275 -- -1.47 0.0671 -- 20 434 -- --
78.22 0.415 6.81 0.536 0.575 -- -0.38 -- 0.0589 14.2 -- -- -- --
78.73 0.416 6.81 0.525 0.576 -- -- -- 0.057 14.3 -- -- -- --
90.85 0.446 6.83 0.422 -- -0.291 -- -- -0.00438 -- 27.01 150 -- --
85.29 0.43 6.82 -- 0.545 0.362 -- -- 0.0153 14.4 15.7 601 -- --
98.42 0.464 6.82 0.501 -- -- -- -- 0.0429 -- -- -- -- --
86 0.434 6.83 -- 0.566 -- -- -- -0.00147 14.3 -- -- -- --
95.45 0.457 6.84 -- -- -0.324 -- -- -0.0556 -- 27.01 150 -- --
105.04 0.478 6.83 -- -- -- -- -- -0.0126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.00 temperature 20.0 270 > th dose independent rect. 4 21
4 68.38 temperature 30.0 270 < th dose dependent rect. 24 6
7 68.51 temperature 30.0 270 < th dose dependent rect. 1 4
12 68.92 temperature 20.0 270 < th dose independent rect. 4 8
16 68.94 atmosphere 1000.0 270 > th dose independent rect. 24 6
19 68.99 temperature 20.0 270 < th dose independent rect. 5 6
24 69.09 temperature 25.0 270 < th dose independent rect. 24 7
31 69.32 temperature 20.0 270 < th dose independent sin 4 NA
38 69.41 temperature 20.0 4320 > th dose independent rect. 21 2
40 69.44 temperature 25.0 270 < th dose independent rect. 1 4
47 69.51 atmosphere 1000.0 270 > th dose independent rect. 1 4
48 69.54 temperature 20.0 4320 < th dose independent rect. 20 3
55 69.57 temperature 15.0 270 > th dose independent rect. 1 17
58 69.61 temperature 15.0 270 > th dose independent rect. 24 19
68 69.66 precipitation 0.1 270 < th dose independent rect. 24 6
69 69.66 precipitation 0.1 270 < th dose dependent rect. 24 6
74 69.71 humidity 50.0 270 > th dose dependent rect. 6 8
75 69.72 atmosphere 995.0 270 > th dose dependent rect. 24 6
76 69.73 atmosphere 1000.0 30 > th dose independent rect. 16 14
81 69.81 radiation 30.0 270 < th dose dependent rect. 24 9
87 69.87 temperature 20.0 270 > th dose independent rect. 5 12
90 69.89 temperature 20.0 270 < th dose independent rect. 1 21
91 69.90 atmosphere 1015.0 270 < th dose independent rect. 24 6
94 69.91 wind 7.0 270 < th dose independent rect. 24 6
96 69.91 temperature 10.0 270 > th dose independent rect. 24 6
99 69.91 humidity 50.0 270 > th dose independent rect. 24 6
103 69.91 radiation 20.0 270 < th dose independent rect. 24 6
106 69.91 wind 9.0 270 < th dose independent rect. 6 18
107 69.91 temperature 10.0 270 > th dose independent rect. 6 18
115 69.94 atmosphere 995.0 10 > th dose independent rect. 6 10
121 69.96 radiation 40.0 270 < th dose dependent rect. 24 6
127 69.99 atmosphere 1010.0 10 < th dose independent rect. 16 14
131 70.00 wind 1.0 270 > th dose independent rect. 6 18
135 70.02 precipitation 0.1 270 < th dose independent rect. 1 4
136 70.02 precipitation 0.1 270 < th dose dependent rect. 1 4
140 70.03 atmosphere 1010.0 270 < th dose independent rect. 24 9
141 70.03 precipitation 0.1 10 < th dose independent rect. 16 14
143 70.03 precipitation 0.1 10 < th dose dependent rect. 16 14
144 70.04 radiation 10.0 270 < th dose independent rect. 24 8
146 70.04 temperature 20.0 270 < th dose independent rect. 20 17
150 70.06 humidity 50.0 270 > th dose dependent rect. 20 16
151 70.06 radiation 1.0 270 < th dose dependent rect. 5 20
152 70.07 wind 1.0 270 > th dose independent rect. 24 6
153 70.07 temperature 10.0 10 > th dose independent rect. 6 10
155 70.07 atmosphere 1015.0 10 < th dose independent rect. 6 10
156 70.07 temperature 10.0 10 > th dose independent rect. 16 14
158 70.07 radiation 40.0 10 < th dose independent rect. 16 14
159 70.08 atmosphere 1000.0 30 > th dose independent rect. 3 3
162 70.09 precipitation 0.1 10 < th dose independent rect. 6 10
167 70.09 wind 3.0 43200 < th dose dependent rect. 21 9
168 70.09 precipitation 0.1 10 < th dose dependent rect. 6 10
193 70.16 atmosphere 995.0 30 > th dose dependent rect. 3 3
201 70.19 temperature 25.0 90 < th dose independent rect. 3 4
216 70.23 precipitation 0.1 270 < th dose independent rect. 14 15
217 70.23 precipitation 0.1 270 < th dose independent rect. 6 18
218 70.23 precipitation 0.1 270 < th dose dependent rect. 14 15
219 70.23 precipitation 0.1 270 < th dose dependent rect. 6 18
220 70.24 wind 9.0 30 < th dose independent rect. 16 14
225 70.26 wind 9.0 270 < th dose independent rect. 5 20
228 70.27 wind 9.0 270 < th dose independent rect. 1 4
229 70.27 temperature 10.0 270 > th dose independent rect. 1 4
232 70.27 humidity 50.0 270 > th dose independent rect. 1 4
236 70.27 atmosphere 1010.0 270 < th dose independent rect. 1 4
238 70.27 radiation 20.0 270 < th dose independent rect. 1 4
241 70.27 humidity 80.0 90 > th dose independent rect. 21 6
244 70.27 temperature 10.0 270 > th dose independent rect. 5 20
248 70.28 temperature 10.0 1440 > th dose independent rect. 7 10
251 70.28 temperature 10.0 1440 > th dose independent rect. 17 14
254 70.28 radiation 40.0 1440 < th dose independent rect. 17 14
258 70.28 radiation 30.0 270 < th dose dependent rect. 1 4
260 70.29 temperature 20.0 270 > th dose independent sin 0 NA
263 70.29 atmosphere 1010.0 270 < th dose independent rect. 24 20
267 70.30 radiation 1.0 270 < th dose independent rect. 1 4
275 70.30 humidity 70.0 720 > th dose dependent rect. 20 16
276 70.31 wind 1.0 30 > th dose independent rect. 6 10
290 70.34 precipitation 0.1 270 < th dose independent rect. 24 21
293 70.34 precipitation 0.1 270 < th dose dependent rect. 24 21
307 70.38 wind 1.0 270 > th dose independent rect. 1 3
308 70.38 humidity 80.0 270 > th dose independent rect. 21 3
319 70.39 temperature 10.0 270 > th dose independent rect. 5 9
320 70.39 atmosphere 995.0 270 > th dose independent rect. 5 9
321 70.39 atmosphere 1015.0 270 < th dose independent rect. 5 9
322 70.39 temperature 10.0 270 > th dose independent rect. 14 15
324 70.39 radiation 30.0 90 < th dose dependent rect. 2 8
362 70.42 humidity 50.0 10 > th dose independent rect. 16 14
375 70.44 radiation 40.0 10 < th dose dependent rect. 16 14
377 70.45 humidity 50.0 10 > th dose independent rect. 6 10
378 70.45 humidity 50.0 270 > th dose independent rect. 24 19
381 70.45 atmosphere 995.0 30 > th dose dependent rect. 6 10
388 70.46 temperature 20.0 270 < th dose dependent rect. 24 12
393 70.47 atmosphere 1015.0 270 < th dose independent rect. 14 15
403 70.48 humidity 50.0 270 > th dose independent rect. 14 15
413 70.49 humidity 80.0 720 > th dose independent rect. 21 15
427 70.51 temperature 20.0 270 > th dose independent rect. 19 6
451 70.54 precipitation 0.1 270 < th dose independent rect. 24 19
453 70.54 precipitation 0.1 270 < th dose dependent rect. 24 19
480 70.59 wind 9.0 270 < th dose independent rect. 5 9
485 70.59 temperature 20.0 270 < th dose dependent sin 5 NA
501 70.60 precipitation 0.1 270 < th dose independent rect. 5 9
505 70.60 precipitation 0.1 270 < th dose dependent rect. 5 9
526 70.62 wind 9.0 30 < th dose independent rect. 6 10
531 70.62 temperature 20.0 270 < th dose dependent rect. 3 8
532 70.62 atmosphere 995.0 10 > th dose dependent rect. 16 14
538 70.63 atmosphere 995.0 270 > th dose independent rect. 6 18
542 70.64 precipitation 0.1 30 < th dose independent rect. 3 3
544 70.64 precipitation 0.1 30 < th dose dependent rect. 3 3
556 70.66 wind 9.0 14400 < th dose independent rect. 5 6
564 70.67 temperature 15.0 270 > th dose independent rect. 9 10
571 70.68 wind 9.0 270 < th dose independent rect. 14 15
578 70.69 wind 9.0 270 < th dose dependent rect. 24 6
585 70.70 temperature 15.0 90 > th dose independent rect. 3 16
588 70.70 precipitation 0.1 270 < th dose independent rect. 5 20
594 70.70 precipitation 0.1 270 < th dose dependent rect. 5 20
596 70.71 radiation 1.0 10 > th dose independent rect. 6 10
601 70.71 temperature 30.0 10 < th dose dependent rect. 3 7
613 70.72 temperature 20.0 270 < th dose dependent rect. 24 22
616 70.73 humidity 50.0 270 > th dose independent rect. 5 9
624 70.73 humidity 70.0 1440 > th dose dependent rect. 1 11
638 70.75 wind 5.0 30 < th dose independent rect. 3 3
641 70.75 atmosphere 1010.0 270 < th dose independent rect. 10 10
644 70.75 radiation 1.0 270 < th dose independent rect. 5 20
674 70.78 humidity 80.0 1440 < th dose independent rect. 21 17
676 70.78 wind 9.0 270 < th dose dependent rect. 1 4
677 70.78 humidity 60.0 90 > th dose dependent rect. 21 6
678 70.79 humidity 50.0 43200 > th dose independent rect. 24 4
707 70.81 humidity 50.0 270 > th dose dependent rect. 21 3
712 70.82 atmosphere 1000.0 10 > th dose independent rect. 3 5
719 70.83 temperature 20.0 270 > th dose independent rect. 21 2
738 70.84 wind 3.0 43200 < th dose dependent rect. 1 1
739 70.84 temperature 30.0 10 < th dose dependent rect. 3 5
746 70.85 atmosphere 1010.0 90 < th dose independent rect. 3 18
756 70.87 wind 1.0 270 > th dose independent rect. 19 5
760 70.87 temperature 10.0 270 > th dose dependent rect. 21 3
786 70.90 temperature 10.0 90 > th dose independent rect. 3 3
789 70.90 humidity 50.0 90 > th dose independent rect. 3 3
793 70.90 atmosphere 1010.0 90 < th dose independent rect. 3 3
795 70.90 radiation 20.0 90 < th dose independent rect. 3 3
824 70.92 radiation 40.0 90 < th dose dependent rect. 3 3
847 70.93 wind 9.0 30 < th dose dependent rect. 3 3
872 70.95 precipitation 0.1 10 < th dose independent rect. 6 21
881 70.95 precipitation 0.1 10 < th dose dependent rect. 6 21
930 70.98 temperature 25.0 720 < th dose dependent rect. 20 16
954 70.99 radiation 10.0 10 < th dose independent rect. 8 22
956 70.99 temperature 10.0 270 > th dose dependent rect. 19 6
966 71.00 humidity 80.0 10 > th dose independent rect. 23 4
991 71.03 wind 9.0 14400 < th dose independent rect. 10 1