Os05g0574700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0574700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.11 | 0.528 | 9.95 | -0.811 | 3.46 | 1.15 | 0.0974 | 6.25 | -0.486 | 8.26 | 0.6699 | 1387 | -- | -- |
| 135.39 | 0.542 | 9.81 | -0.186 | 3.5 | 0.608 | 0.889 | -- | -0.198 | 8.51 | 11.23 | 12200 | -- | -- |
| 126.06 | 0.523 | 9.95 | -0.794 | 3.44 | 1.17 | -- | 6.25 | -0.487 | 8.24 | 0.6048 | 1381 | -- | -- |
| 136.18 | 0.544 | 9.81 | -0.0688 | 3.47 | 0.607 | -- | -- | -0.204 | 8.51 | 6.26 | 12303 | -- | -- |
| 322.41 | 0.836 | 9.86 | 0.0603 | -- | 4.89 | -- | 1.5 | 0.162 | -- | 2.207 | 2429 | -- | -- |
| 144.65 | 0.564 | 9.84 | -0.164 | 3.58 | -- | 0.841 | -- | -0.367 | 8.42 | -- | -- | -- | -- |
| 146.88 | 0.568 | 9.84 | -0.139 | 3.58 | -- | -- | -- | -0.367 | 8.41 | -- | -- | -- | -- |
| 330.54 | 0.847 | 9.82 | 0.474 | -- | 5.16 | -- | -- | 0.2 | -- | 2.281 | 2425 | -- | -- |
| 135.43 | 0.542 | 9.81 | -- | 3.42 | 0.807 | -- | -- | -0.159 | 8.47 | 5.309 | 12332 | -- | -- |
| 859.03 | 1.37 | 9.94 | -0.119 | -- | -- | -- | -- | -0.331 | -- | -- | -- | -- | -- |
| 147.38 | 0.568 | 9.84 | -- | 3.57 | -- | -- | -- | -0.352 | 8.41 | -- | -- | -- | -- |
| 336.18 | 0.854 | 9.83 | -- | -- | 5.08 | -- | -- | 0.146 | -- | 2.385 | 2422 | -- | -- |
| 859.4 | 1.37 | 9.93 | -- | -- | -- | -- | -- | -0.318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.56 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 21 |
| 6 | 119.74 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 10 |
| 7 | 120.11 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 8 | 120.28 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 15 |
| 18 | 121.53 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 2 |
| 28 | 122.69 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 10 | 5 |
| 30 | 122.85 | temperature | 15.0 | 90 | > th | dose independent | rect. | 21 | 10 |
| 32 | 122.95 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 19 |
| 38 | 123.31 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 39 | 123.34 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 49 | 123.91 | temperature | 15.0 | 10 | > th | dose independent | rect. | 21 | 21 |
| 69 | 124.35 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 71 | 124.36 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 76 | 124.39 | temperature | 25.0 | 720 | > th | dose independent | rect. | 8 | 2 |
| 81 | 124.42 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 88 | 124.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 91 | 124.74 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 92 | 124.74 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 93 | 124.76 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 95 | 124.77 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 13 |
| 105 | 124.85 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 106 | 124.88 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 117 | 125.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 132 | 125.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 136 | 125.23 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 138 | 125.25 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 174 | 125.37 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 175 | 125.37 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 188 | 125.49 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 10 | 8 |
| 200 | 125.69 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 209 | 125.75 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 213 | 125.76 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 216 | 125.82 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 218 | 125.82 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 221 | 125.83 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 242 | 125.92 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 6 |
| 251 | 125.94 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 264 | 125.97 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 6 |
| 268 | 126.00 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 275 | 126.06 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 288 | 126.07 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 298 | 126.11 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 312 | 126.16 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 314 | 126.17 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 316 | 126.17 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 326 | 126.27 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 328 | 126.28 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 341 | 126.35 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 348 | 126.39 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 356 | 126.41 | temperature | 15.0 | 10 | > th | dose independent | rect. | 21 | 10 |
| 369 | 126.43 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 379 | 126.49 | radiation | 1.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 394 | 126.60 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 398 | 126.61 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 404 | 126.62 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 15 |
| 413 | 126.66 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 415 | 126.67 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 18 |
| 438 | 126.72 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 454 | 126.78 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 455 | 126.78 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 9 | 7 |
| 464 | 126.83 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 466 | 126.83 | radiation | 40.0 | 720 | < th | dose independent | rect. | 3 | 19 |
| 467 | 126.84 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 482 | 126.91 | radiation | 1.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 486 | 126.92 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 487 | 126.92 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 489 | 126.92 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 5 |
| 493 | 126.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 496 | 126.98 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 516 | 127.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 18 |
| 518 | 127.12 | humidity | 90.0 | 270 | < th | dose independent | rect. | 10 | 4 |
| 520 | 127.12 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 524 | 127.15 | humidity | 60.0 | 270 | > th | dose independent | rect. | 11 | 3 |
| 534 | 127.19 | radiation | 40.0 | 720 | < th | dose independent | rect. | 2 | 21 |
| 539 | 127.21 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 16 |
| 548 | 127.25 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 549 | 127.25 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 11 | 4 |
| 559 | 127.27 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 10 | 3 |
| 566 | 127.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 14 |
| 572 | 127.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 575 | 127.33 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 10 | 8 |
| 594 | 127.38 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 597 | 127.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 20 |
| 621 | 127.42 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 15 |
| 635 | 127.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 22 |
| 638 | 127.44 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 694 | 127.49 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 3 |
| 739 | 127.55 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 746 | 127.56 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 9 | 1 |
| 752 | 127.56 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 22 |
| 753 | 127.56 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 756 | 127.57 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 20 |
| 765 | 127.58 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 8 |
| 771 | 127.59 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 793 | 127.65 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 22 |
| 795 | 127.65 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 14 |
| 798 | 127.67 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 822 | 127.76 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 833 | 127.77 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 834 | 127.78 | radiation | 1.0 | 1440 | > th | dose independent | no | NA | NA |
| 883 | 127.78 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 917 | 127.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 927 | 127.83 | wind | 3.0 | 270 | > th | dose independent | rect. | 16 | 3 |
| 929 | 127.83 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 6 |
| 931 | 127.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 18 |
| 936 | 127.84 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 939 | 127.84 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 943 | 127.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 961 | 127.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 18 |
| 978 | 127.88 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 980 | 127.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 6 |
| 984 | 127.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 6 |
| 996 | 127.90 | temperature | 25.0 | 720 | < th | dose independent | rect. | 4 | 9 |