Os05g0574600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fatty acid elongase 1-like protein.
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Os05g0574600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fatty acid elongase 1-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.4 | 0.591 | 8.22 | 0.0734 | 0.403 | -1.34 | -1.72 | 1.68 | -0.139 | 6.96 | 23.4 | 38 | -- | -- |
| 160.97 | 0.595 | 8.19 | 0.295 | 0.37 | -1.61 | -1.75 | -- | -0.0779 | 7.48 | 22.68 | 66 | -- | -- |
| 164.94 | 0.603 | 8.22 | 0.0289 | 0.396 | -1.39 | -- | 1.72 | -0.144 | 6.25 | 23.4 | 38 | -- | -- |
| 167.05 | 0.606 | 8.19 | 0.219 | 0.41 | -1.89 | -- | -- | -0.0758 | 6.19 | 21.91 | 42 | -- | -- |
| 173.06 | 0.616 | 8.23 | 0.0414 | -- | -1.35 | -- | 1.76 | -0.132 | -- | 23.4 | 38 | -- | -- |
| 192.97 | 0.651 | 8.14 | 0.618 | 0.421 | -- | -1.8 | -- | 0.118 | 8.43 | -- | -- | -- | -- |
| 203.21 | 0.668 | 8.14 | 0.562 | 0.425 | -- | -- | -- | 0.118 | 8.32 | -- | -- | -- | -- |
| 175.75 | 0.62 | 8.19 | 0.239 | -- | -1.84 | -- | -- | -0.062 | -- | 21.91 | 42 | -- | -- |
| 168.22 | 0.607 | 8.2 | -- | 0.416 | -1.99 | -- | -- | -0.108 | 6.06 | 21.91 | 42 | -- | -- |
| 213.25 | 0.682 | 8.15 | 0.565 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 211.53 | 0.68 | 8.16 | -- | 0.428 | -- | -- | -- | 0.0554 | 8.22 | -- | -- | -- | -- |
| 177.15 | 0.622 | 8.2 | -- | -- | -1.94 | -- | -- | -0.0961 | -- | 21.91 | 42 | -- | -- |
| 221.65 | 0.695 | 8.17 | -- | -- | -- | -- | -- | 0.0599 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.06 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 15 |
| 4 | 149.54 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 15 |
| 6 | 149.67 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 7 | 149.71 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 20 |
| 9 | 149.93 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 13 | 150.43 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 17 | 150.61 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 20 | 150.89 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 14 |
| 35 | 151.24 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 36 | 151.25 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 40 | 151.32 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 16 |
| 43 | 151.45 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 46 | 151.47 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 54 | 151.60 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 59 | 151.66 | humidity | 70 | 43200 | > th | dose independent | sin | 5 | NA |
| 62 | 151.67 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 64 | 151.68 | radiation | 10 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 74 | 151.73 | temperature | 20 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 110 | 151.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 137 | 152.13 | radiation | 20 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 140 | 152.17 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 171 | 152.28 | radiation | 10 | 43200 | > th | dose independent | sin | 7 | NA |
| 178 | 152.33 | radiation | 20 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 180 | 152.34 | temperature | 25 | 270 | < th | dose dependent | sin | 17 | NA |
| 181 | 152.35 | humidity | 70 | 43200 | < th | dose independent | sin | 5 | NA |
| 183 | 152.35 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 203 | 152.47 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 267 | 152.72 | temperature | 20 | 270 | > th | dose independent | sin | 18 | NA |
| 269 | 152.72 | radiation | 20 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 276 | 152.79 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 18 |
| 358 | 153.25 | temperature | 20 | 720 | < th | dose independent | sin | 20 | NA |
| 362 | 153.30 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 373 | 153.39 | temperature | 20 | 270 | < th | dose independent | sin | 18 | NA |
| 385 | 153.45 | temperature | 20 | 720 | > th | dose independent | sin | 20 | NA |
| 389 | 153.46 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 416 | 153.60 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 432 | 153.66 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 464 | 153.84 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 467 | 153.86 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 469 | 153.86 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 487 | 153.92 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 491 | 153.93 | humidity | 70 | 43200 | > th | dose independent | no | NA | NA |
| 500 | 153.96 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 514 | 153.98 | humidity | 80 | 43200 | < th | dose dependent | sin | 5 | NA |
| 534 | 154.00 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 541 | 154.00 | humidity | 70 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 544 | 154.01 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 548 | 154.02 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 549 | 154.02 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 552 | 154.02 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 565 | 154.05 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 19 |
| 593 | 154.08 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 599 | 154.10 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 611 | 154.12 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 744 | 154.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 770 | 154.48 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 778 | 154.49 | humidity | 70 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 806 | 154.54 | wind | 5 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 902 | 154.70 | radiation | 20 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 954 | 154.87 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 1 |