Os05g0574100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os05g0574100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 443.93 | 0.99 | 4.32 | -3.89 | 2.39 | -1.59 | -4.01 | 3.34 | -1.44 | 7.17 | 9.612 | 1416 | -- | -- |
| 459.44 | 0.998 | 4.31 | -3.79 | 2.48 | -1.46 | -4.09 | -- | -1.43 | 7.39 | 30 | 1343 | -- | -- |
| 484.12 | 1.02 | 4.33 | -3.98 | 2.33 | -1.55 | -- | 3.28 | -1.47 | 6.96 | 9.068 | 1434 | -- | -- |
| 500.75 | 1.04 | 4.31 | -3.79 | 2.48 | -1.41 | -- | -- | -1.39 | 7.37 | 30 | 1346 | -- | -- |
| 761.52 | 1.29 | 4.39 | -4.13 | -- | -1.9 | -- | 3.97 | -1.48 | -- | 7.881 | 1480 | -- | -- |
| 524.68 | 1.07 | 4.24 | -3.52 | 2.38 | -- | -3.99 | -- | -1.06 | 7.1 | -- | -- | -- | -- |
| 566.12 | 1.11 | 4.24 | -3.6 | 2.38 | -- | -- | -- | -1.05 | 6.95 | -- | -- | -- | -- |
| 789.87 | 1.31 | 4.36 | -3.61 | -- | -1.76 | -- | -- | -1.33 | -- | 8.095 | 1473 | -- | -- |
| 883.44 | 1.38 | 4.31 | -- | 2.41 | -1.04 | -- | -- | -1.01 | 7.34 | 30 | 1346 | -- | -- |
| 863.75 | 1.37 | 4.29 | -3.55 | -- | -- | -- | -- | -1.01 | -- | -- | -- | -- | -- |
| 907.81 | 1.41 | 4.15 | -- | 2.34 | -- | -- | -- | -0.649 | 7.04 | -- | -- | -- | -- |
| 1120.77 | 1.56 | 4.27 | -- | -- | -1.69 | -- | -- | -0.914 | -- | 10 | 1485 | -- | -- |
| 1196.41 | 1.61 | 4.2 | -- | -- | -- | -- | -- | -0.612 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 442.87 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 21 |
| 2 | 443.62 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 5 | 444.35 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 7 | 444.53 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 9 | 444.79 | radiation | 10 | 1440 | < th | dose dependent | rect. | 6 | 11 |
| 12 | 444.93 | radiation | 10 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 17 | 445.01 | radiation | 10 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 19 | 445.02 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 22 | 445.04 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 32 | 445.12 | radiation | 10 | 1440 | < th | dose dependent | rect. | 6 | 19 |
| 77 | 445.38 | radiation | 10 | 1440 | < th | dose dependent | no | NA | NA |
| 79 | 445.39 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 114 | 446.61 | radiation | 10 | 1440 | < th | dose dependent | sin | 0 | NA |
| 130 | 447.72 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 146 | 447.98 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 151 | 448.40 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 266 | 449.24 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 392 | 450.61 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 472 | 451.79 | radiation | 10 | 1440 | < th | dose dependent | sin | 13 | NA |
| 498 | 452.18 | humidity | 80 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 500 | 452.26 | radiation | 40 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 507 | 452.54 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 508 | 452.54 | radiation | 20 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 511 | 452.56 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 514 | 452.58 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 556 | 452.83 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 22 |
| 581 | 452.89 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 627 | 452.94 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 639 | 452.94 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 759 | 453.28 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 771 | 453.35 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 807 | 453.47 | radiation | 20 | 1440 | < th | dose independent | sin | 3 | NA |
| 846 | 453.80 | radiation | 20 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 847 | 453.80 | radiation | 30 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 865 | 453.88 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 877 | 453.98 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 13 |
| 878 | 453.99 | radiation | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 917 | 454.18 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 934 | 454.22 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 963 | 454.48 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 986 | 454.62 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 990 | 454.63 | radiation | 20 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 995 | 454.66 | radiation | 1 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 997 | 454.69 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 1000 | 454.69 | radiation | 1 | 1440 | > th | dose dependent | rect. | 5 | 12 |