Os05g0574000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os05g0574000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 332.03 | 0.856 | 2.96 | -0.024 | 0.207 | 0.55 | -1.11 | 2.87 | -0.0408 | 16.3 | 40.83 | 80 | -- | -- |
| 342.68 | 0.869 | 2.95 | -0.0332 | 0.222 | 0.325 | -0.871 | -- | -0.0139 | 17.5 | 41.58 | 72 | -- | -- |
| 335.17 | 0.853 | 2.96 | -0.0151 | 0.197 | 0.592 | -- | 2.53 | -0.0423 | 17 | 40.82 | 80 | -- | -- |
| 341.32 | 0.86 | 2.94 | -0.00861 | 0.185 | 0.467 | -- | -- | -0.00245 | 17.2 | 39.15 | 24 | -- | -- |
| 336.79 | 0.855 | 2.96 | -0.0294 | -- | 0.679 | -- | 2.53 | -0.057 | -- | 41.65 | 76 | -- | -- |
| 346.05 | 0.872 | 2.94 | -0.0148 | 0.288 | -- | -0.619 | -- | -0.0161 | 16.2 | -- | -- | -- | -- |
| 346.74 | 0.872 | 2.94 | -0.0203 | 0.289 | -- | -- | -- | -0.0195 | 15.1 | -- | -- | -- | -- |
| 343.24 | 0.863 | 2.94 | -0.00732 | -- | 0.512 | -- | -- | -0.0109 | -- | 38.72 | 24 | -- | -- |
| 340.85 | 0.86 | 2.95 | -- | 0.203 | 0.464 | -- | -- | -0.014 | 17.2 | 38.64 | 20 | -- | -- |
| 351.49 | 0.876 | 2.95 | -0.0326 | -- | -- | -- | -- | -0.027 | -- | -- | -- | -- | -- |
| 346.75 | 0.871 | 2.94 | -- | 0.289 | -- | -- | -- | -0.0172 | 15.1 | -- | -- | -- | -- |
| 343.01 | 0.863 | 2.95 | -- | -- | 0.49 | -- | -- | -0.0206 | -- | 38.64 | 20 | -- | -- |
| 351.52 | 0.875 | 2.94 | -- | -- | -- | -- | -- | -0.0234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 324.12 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 10 |
| 2 | 325.11 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 3 | 325.22 | temperature | 15.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 4 | 325.27 | temperature | 20.0 | 30 | < th | dose independent | rect. | 9 | 3 |
| 11 | 325.30 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 9 | 4 |
| 15 | 326.07 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 17 | 326.19 | temperature | 15.0 | 720 | < th | dose independent | rect. | 11 | 14 |
| 69 | 327.28 | wind | 3.0 | 90 | < th | dose independent | rect. | 15 | 4 |
| 83 | 327.43 | wind | 3.0 | 90 | < th | dose dependent | rect. | 15 | 5 |
| 105 | 328.06 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 106 | 328.07 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 14 | 9 |
| 160 | 329.16 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 12 | 9 |
| 162 | 329.19 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 14 | 7 |
| 205 | 329.62 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 222 | 329.62 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 243 | 329.71 | radiation | 40.0 | 270 | > th | dose independent | rect. | 9 | 2 |
| 247 | 329.76 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 260 | 329.93 | temperature | 20.0 | 90 | < th | dose independent | rect. | 9 | 9 |
| 261 | 329.93 | radiation | 40.0 | 270 | > th | dose independent | rect. | 15 | 20 |
| 263 | 329.99 | temperature | 15.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 288 | 330.12 | radiation | 1.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 314 | 330.30 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 22 |
| 358 | 330.59 | temperature | 15.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 385 | 330.84 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 23 |
| 386 | 330.84 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 389 | 330.86 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 14 | 13 |
| 393 | 330.88 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 408 | 331.05 | wind | 5.0 | 10 | < th | dose dependent | rect. | 15 | 3 |
| 413 | 331.08 | radiation | 20.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 497 | 331.19 | wind | 1.0 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 501 | 331.21 | temperature | 15.0 | 720 | < th | dose independent | sin | 7 | NA |
| 515 | 331.26 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 542 | 331.32 | radiation | 40.0 | 270 | > th | dose independent | sin | 10 | NA |
| 585 | 331.58 | wind | 3.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 589 | 331.59 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 646 | 331.78 | wind | 3.0 | 10 | < th | dose independent | rect. | 15 | 4 |
| 651 | 331.83 | radiation | 40.0 | 90 | > th | dose independent | sin | 2 | NA |
| 674 | 331.96 | temperature | 15.0 | 720 | > th | dose independent | sin | 13 | NA |
| 719 | 332.16 | wind | 3.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 733 | 332.25 | atmosphere | 1005.0 | 270 | < th | dose independent | sin | 18 | NA |
| 761 | 332.34 | radiation | 40.0 | 270 | < th | dose independent | sin | 10 | NA |
| 764 | 332.37 | radiation | 40.0 | 90 | > th | dose independent | no | NA | NA |
| 904 | 332.38 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 3 |
| 906 | 332.38 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 14 | 13 |
| 940 | 332.50 | temperature | 25.0 | 90 | > th | dose independent | rect. | 11 | 2 |
| 946 | 332.51 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 4 |