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Os05g0571400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.013) R2 : 0.487
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.611 (0.0317) R2dC : 0.42 R2C : 0.398
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.215 (0.0274) R2dN8 : 0.0895 R2N8 : 0.0675
σ : 0.245
deviance : 27.5
__
_____
C
peak time of C : 21.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.16 0.216 12.7 -0.331 0.628 -0.555 -0.366 0.0949 -0.28 22.1 80 1550 -- --
21.16 0.214 12.7 -0.325 0.626 -0.548 -0.363 -- -0.279 22.1 80 1551 -- --
21.67 0.217 12.7 -0.313 0.631 -0.547 -- -0.014 -0.278 22.2 80.71 1561 -- --
21.67 0.217 12.7 -0.309 0.629 -0.548 -- -- -0.278 22.2 80.19 1561 -- --
27.57 0.245 12.7 -0.395 -- -0.818 -- 0.36 -0.277 -- 78.41 872 -- --
24.61 0.233 12.7 -0.316 0.611 -- -0.355 -- -0.249 21.9 -- -- -- --
25.09 0.235 12.7 -0.302 0.612 -- -- -- -0.248 21.9 -- -- -- --
27.91 0.246 12.7 -0.349 -- -0.791 -- -- -0.267 -- 78 855 -- --
24 0.228 12.7 -- 0.625 -0.545 -- -- -0.247 22.1 82 1562 -- --
47.56 0.322 12.7 -0.295 -- -- -- -- -0.248 -- -- -- -- --
27.5 0.245 12.7 -- 0.611 -- -- -- -0.215 21.9 -- -- -- --
30.88 0.259 12.7 -- -- -0.766 -- -- -0.245 -- 79.02 852 -- --
49.86 0.33 12.7 -- -- -- -- -- -0.216 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.52 humidity 90 720 > th dose dependent rect. 8 16
2 20.58 temperature 25 4320 > th dose dependent rect. 4 2
7 20.85 humidity 60 720 > th dose dependent rect. 19 4
9 20.90 temperature 25 4320 > th dose independent rect. 5 1
14 21.00 humidity 80 720 > th dose dependent rect. 4 20
15 21.01 humidity 90 720 > th dose dependent rect. 13 11
20 21.07 humidity 80 720 > th dose independent rect. 4 19
24 21.09 humidity 80 1440 < th dose independent sin 1 NA
27 21.09 humidity 90 720 > th dose dependent sin 20 NA
29 21.09 humidity 90 720 > th dose dependent rect. 19 5
35 21.10 humidity 70 1440 > th dose dependent rect. 11 2
36 21.10 humidity 50 720 > th dose dependent rect. 19 12
39 21.11 humidity 80 1440 > th dose independent sin 0 NA
41 21.11 humidity 80 1440 < th dose independent rect. 7 8
43 21.11 humidity 80 1440 > th dose independent rect. 20 20
45 21.12 humidity 80 1440 > th dose independent rect. 23 17
56 21.13 humidity 80 1440 > th dose independent rect. 23 19
57 21.13 humidity 80 1440 > th dose independent rect. 23 22
59 21.13 humidity 50 720 > th dose dependent rect. 17 14
66 21.15 humidity 80 1440 < th dose independent rect. 2 13
67 21.15 humidity 80 1440 < th dose independent rect. 7 14
72 21.15 humidity 50 720 > th dose dependent rect. 15 16
78 21.16 humidity 90 720 < th dose dependent rect. 16 17
81 21.17 temperature 25 4320 < th dose independent rect. 5 1
95 21.18 humidity 80 1440 < th dose independent rect. 7 11
97 21.18 humidity 80 1440 > th dose independent rect. 7 14
108 21.18 humidity 70 720 > th dose dependent rect. 9 22
124 21.20 humidity 80 1440 < th dose independent rect. 9 5
132 21.20 humidity 80 1440 < th dose independent rect. 2 16
134 21.20 humidity 80 1440 > th dose independent rect. 7 20
143 21.21 humidity 80 1440 > th dose independent rect. 11 3
148 21.21 humidity 80 1440 > th dose independent rect. 7 18
161 21.21 humidity 80 90 > th dose dependent rect. 5 21
167 21.22 humidity 80 1440 > th dose independent rect. 6 12
175 21.22 humidity 80 1440 > th dose independent rect. 2 16
191 21.23 humidity 80 1440 > th dose independent rect. 9 12
214 21.23 humidity 90 720 < th dose dependent rect. 16 12
219 21.24 humidity 80 1440 > th dose independent rect. 9 6
220 21.24 humidity 80 1440 > th dose independent rect. 7 9
226 21.24 humidity 80 1440 > th dose independent rect. 2 14
299 21.27 humidity 80 1440 > th dose independent no NA NA
327 21.27 humidity 80 1440 > th dose independent rect. 9 23
328 21.27 humidity 80 1440 > th dose independent rect. 17 23
412 21.31 humidity 80 1440 < th dose independent rect. 20 19
417 21.31 humidity 80 1440 < th dose independent rect. 19 23
420 21.31 radiation 1 1440 < th dose dependent rect. 7 10
449 21.32 humidity 80 1440 > th dose independent rect. 11 23
477 21.34 humidity 80 720 < th dose independent rect. 16 5
498 21.34 humidity 50 720 > th dose dependent sin 13 NA
528 21.36 humidity 80 720 > th dose independent rect. 14 21
537 21.36 humidity 80 1440 < th dose independent rect. 16 23
548 21.36 humidity 70 720 > th dose dependent rect. 18 23
554 21.37 humidity 80 720 < th dose independent rect. 15 20
588 21.38 humidity 70 720 > th dose dependent no NA NA
589 21.38 humidity 90 720 < th dose dependent sin 12 NA
602 21.39 humidity 80 1440 < th dose independent no NA NA
615 21.39 humidity 70 720 > th dose dependent sin 15 NA
641 21.40 temperature 25 720 > th dose dependent rect. 16 3
702 21.43 humidity 80 1440 < th dose independent rect. 9 23
743 21.45 humidity 80 720 < th dose independent rect. 16 3
769 21.46 humidity 80 720 > th dose independent rect. 14 17
796 21.47 humidity 80 1440 < th dose independent rect. 11 23
817 21.48 humidity 80 720 > th dose independent rect. 15 8
863 21.49 humidity 90 720 > th dose dependent rect. 23 1
873 21.49 humidity 50 720 > th dose dependent rect. 19 18