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Os05g0571200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to WRKY transcription factor 19.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.27 (0.0576) R2 : 0.367
β1 : 1.17 (0.205) R2dD : 0.0506 R2D : 0.000303
β2 : 0.936 (0.128) R2dC : 0.075 R2C : 0.0592
β3 : -0.66 (0.321) R2dE : 0.0084 R2E : 0.000223
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.33 (1.3) R2dD*E : 0.0599 R2D*E : 0.0399
γ1 : 1.23 (0.117) R2dN8 : 0.221 R2N8 : 0.139
σ : 0.997
deviance : 458.29
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C
peak time of C : 10.6
E
wheather : wind
threshold : 2.575
memory length : 3782
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17
open length of G : 15.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
458.5 1.01 7.26 1.15 0.936 -0.643 0.0203 7.23 1.23 10.6 2.663 3799 16.9 15.4
485.35 1.03 7.18 1.34 0.914 -1.04 -0.355 -- 1.32 11.1 4.983 2206 17.6 13.3
458.29 0.997 7.27 1.17 0.936 -0.66 -- 7.33 1.23 10.6 2.575 3782 17 15.3
484.4 1.03 7.18 1.27 0.874 -1.03 -- -- 1.28 10.9 4.722 2200 17.7 13.5
510.34 1.05 7.3 1.14 -- -0.707 -- 7.46 1.23 -- 2.58 3652 16.9 15.3
513.08 1.06 7.16 1.35 0.978 -- -0.57 -- 1.29 11.2 -- -- -- --
514.31 1.06 7.16 1.33 0.985 -- -- -- 1.29 11 -- -- -- --
514.24 1.06 7.19 0.501 -- -2.56 -- -- 1.44 -- 1.739 2126 13.5 15.3
517.93 1.06 7.17 -- 0.899 -1.03 -- -- 1.2 10.8 4.526 2383 16.4 13.9
574.6 1.12 7.18 1.31 -- -- -- -- 1.28 -- -- -- -- --
560.79 1.11 7.19 -- 0.974 -- -- -- 1.14 10.9 -- -- -- --
527.11 1.07 7.17 -- -- -2.69 -- -- 1.39 -- 1.366 2120 13.5 14.8
619.61 1.16 7.22 -- -- -- -- -- 1.14 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 462.94 wind 3 4320 > th dose dependent rect. 17 15
4 464.39 wind 3 4320 > th dose dependent rect. 17 12
5 464.45 wind 3 4320 > th dose dependent sin 12 NA
6 464.56 temperature 15 14400 > th dose independent rect. 2 10
8 464.60 temperature 15 14400 > th dose independent rect. 24 11
9 464.65 temperature 15 14400 < th dose independent rect. 5 1
18 464.87 temperature 15 14400 > th dose independent rect. 24 6
20 464.91 temperature 15 14400 < th dose independent rect. 1 5
28 464.98 temperature 15 14400 < th dose independent rect. 2 8
33 465.07 temperature 15 14400 < th dose independent rect. 2 2
56 465.32 temperature 15 14400 > th dose independent sin 6 NA
148 466.53 temperature 20 14400 > th dose independent rect. 14 1
170 466.72 temperature 20 14400 < th dose dependent rect. 13 1
171 466.73 temperature 20 14400 < th dose independent rect. 13 1
173 466.74 wind 9 4320 > th dose independent rect. 18 3
181 466.87 temperature 15 14400 > th dose independent rect. 23 1
195 467.00 wind 9 4320 < th dose dependent rect. 17 14
207 467.20 wind 7 4320 > th dose dependent rect. 18 3
229 467.43 temperature 20 14400 < th dose dependent rect. 18 1
237 467.53 wind 9 4320 < th dose independent rect. 18 2
262 467.77 wind 5 4320 > th dose independent rect. 17 16
265 467.78 wind 7 4320 < th dose independent rect. 17 4
266 467.79 temperature 15 14400 < th dose independent sin 7 NA
309 468.11 temperature 20 14400 < th dose dependent rect. 11 8
316 468.15 wind 5 4320 < th dose independent rect. 17 16
354 468.40 wind 7 4320 < th dose independent rect. 17 11
421 468.85 wind 7 4320 < th dose independent rect. 15 19
426 468.86 temperature 20 14400 < th dose dependent rect. 6 13
442 469.03 wind 7 4320 > th dose independent rect. 17 11
457 469.07 wind 7 4320 > th dose independent rect. 15 19
472 469.21 temperature 15 14400 > th dose independent rect. 5 2
491 469.35 temperature 15 14400 < th dose independent rect. 23 1
569 469.76 radiation 1 14400 < th dose independent rect. 9 1
582 469.83 temperature 20 14400 < th dose dependent rect. 9 1
590 469.90 temperature 15 14400 > th dose independent rect. 9 1
603 469.97 temperature 15 14400 > th dose independent rect. 8 23
604 469.97 wind 9 4320 < th dose dependent sin 12 NA
605 469.98 wind 5 4320 > th dose independent sin 12 NA
624 470.05 temperature 15 14400 > th dose independent no NA NA
627 470.06 wind 5 4320 < th dose independent sin 12 NA
650 470.18 temperature 15 14400 < th dose independent rect. 9 1
679 470.36 temperature 15 14400 > th dose independent rect. 2 23
716 470.60 wind 9 4320 > th dose independent rect. 15 7
729 470.64 wind 9 4320 > th dose dependent rect. 15 6
743 470.75 radiation 1 14400 > th dose independent rect. 9 1
747 470.76 wind 9 4320 < th dose independent rect. 15 8
766 470.88 wind 9 4320 < th dose independent rect. 15 6
857 471.27 radiation 20 270 > th dose dependent rect. 16 1
872 471.29 temperature 20 14400 < th dose dependent sin 22 NA
903 471.45 wind 3 4320 > th dose dependent rect. 21 1
919 471.51 humidity 50 270 > th dose independent rect. 9 16
946 471.67 wind 9 4320 < th dose dependent rect. 24 7