Os05g0570300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os05g0570300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.13 | 0.231 | 2.96 | -0.0369 | 0.0722 | -0.751 | -0.0544 | 0.00521 | 0.0213 | 8.79 | 9.1 | 19 | -- | -- |
| 24.13 | 0.229 | 2.96 | -0.0369 | 0.0722 | -0.753 | -0.0546 | -- | 0.0213 | 8.79 | 9.101 | 18 | -- | -- |
| 24.13 | 0.229 | 2.96 | -0.0369 | 0.0722 | -0.751 | -- | 0.0225 | 0.0213 | 8.79 | 9.1 | 19 | -- | -- |
| 24.13 | 0.229 | 2.96 | -0.0388 | 0.072 | -0.75 | -- | -- | 0.0213 | 9.06 | 9.118 | 18 | -- | -- |
| 24.43 | 0.23 | 2.97 | -0.0381 | -- | -0.761 | -- | 0.0126 | 0.0221 | -- | 9.1 | 18 | -- | -- |
| 25.35 | 0.236 | 2.97 | -0.0795 | 0.0789 | -- | -0.052 | -- | 0.00576 | 10.1 | -- | -- | -- | -- |
| 25.36 | 0.236 | 2.97 | -0.0815 | 0.0791 | -- | -- | -- | 0.00567 | 10.2 | -- | -- | -- | -- |
| 24.43 | 0.23 | 2.97 | -0.038 | -- | -0.764 | -- | -- | 0.0221 | -- | 9.1 | 18 | -- | -- |
| 24.17 | 0.229 | 2.96 | -- | 0.0718 | -0.776 | -- | -- | 0.026 | 9.06 | 9.123 | 18 | -- | -- |
| 25.74 | 0.237 | 2.97 | -0.0826 | -- | -- | -- | -- | 0.00551 | -- | -- | -- | -- | -- |
| 25.53 | 0.236 | 2.97 | -- | 0.0795 | -- | -- | -- | 0.0147 | 10.3 | -- | -- | -- | -- |
| 24.47 | 0.23 | 2.97 | -- | -- | -0.79 | -- | -- | 0.0267 | -- | 9.132 | 18 | -- | -- |
| 25.92 | 0.238 | 2.97 | -- | -- | -- | -- | -- | 0.0147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.88 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 29 | 23.02 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 100 | 23.24 | wind | 9.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 104 | 23.32 | wind | 9.0 | 30 | < th | dose independent | sin | 6 | NA |
| 116 | 23.37 | wind | 9.0 | 30 | > th | dose independent | sin | 6 | NA |
| 153 | 23.48 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 193 | 23.58 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 261 | 23.87 | radiation | 20.0 | 10 | < th | dose independent | rect. | 11 | 2 |
| 351 | 24.00 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 355 | 24.01 | radiation | 30.0 | 10 | < th | dose independent | rect. | 11 | 13 |
| 362 | 24.03 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 8 | 4 |
| 406 | 24.07 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 414 | 24.10 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 437 | 24.13 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 571 | 24.24 | wind | 3.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 606 | 24.28 | radiation | 30.0 | 30 | < th | dose independent | rect. | 11 | 6 |
| 609 | 24.29 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 610 | 24.29 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 8 |
| 614 | 24.29 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 620 | 24.29 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 640 | 24.31 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 646 | 24.31 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 11 | 13 |
| 662 | 24.32 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 18 | 18 |
| 680 | 24.34 | radiation | 30.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 682 | 24.34 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 699 | 24.36 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 700 | 24.36 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 701 | 24.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 704 | 24.36 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 708 | 24.36 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 714 | 24.36 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 717 | 24.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 739 | 24.36 | radiation | 20.0 | 270 | < th | dose independent | rect. | 19 | 17 |
| 740 | 24.36 | radiation | 30.0 | 30 | < th | dose independent | rect. | 11 | 21 |
| 741 | 24.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 744 | 24.36 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 745 | 24.36 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 753 | 24.37 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 755 | 24.37 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 756 | 24.37 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 759 | 24.37 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 789 | 24.38 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 792 | 24.38 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 795 | 24.38 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 796 | 24.38 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 800 | 24.38 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 801 | 24.38 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 802 | 24.38 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 805 | 24.38 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 810 | 24.38 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 842 | 24.38 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 843 | 24.38 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 845 | 24.38 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 848 | 24.38 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 854 | 24.38 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 872 | 24.39 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 874 | 24.39 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 920 | 24.40 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 932 | 24.41 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 16 |
| 972 | 24.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 973 | 24.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 21 | 8 |
| 974 | 24.43 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 975 | 24.43 | humidity | 50.0 | 720 | > th | dose independent | rect. | 21 | 8 |
| 978 | 24.43 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 21 | 8 |
| 979 | 24.43 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 9 | 8 |
| 980 | 24.43 | radiation | 20.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 986 | 24.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 5 | 16 |
| 987 | 24.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 995 | 24.43 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |