Os05g0570200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os05g0570200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.86 | 0.529 | 3.05 | -0.918 | 0.1 | 1.94 | -0.231 | -15.8 | -0.0464 | 9.52 | 30.02 | 7 | -- | -- |
| 131.46 | 0.538 | 2.99 | -0.394 | 0.112 | 0.0889 | -0.245 | -- | -0.0524 | 10.1 | 30.02 | 7 | -- | -- |
| 127.04 | 0.525 | 3.05 | -0.919 | 0.102 | 1.92 | -- | -15.8 | -0.0468 | 10.3 | 30.05 | 6 | -- | -- |
| 131.6 | 0.534 | 2.99 | -0.404 | 0.112 | 0.112 | -- | -- | -0.0518 | 10.7 | 29.9 | 6 | -- | -- |
| 127.66 | 0.526 | 3.05 | -0.937 | -- | 1.96 | -- | -16 | -0.0466 | -- | 30 | 6 | -- | -- |
| 131.52 | 0.538 | 2.99 | -0.39 | 0.115 | -- | -0.229 | -- | -0.0553 | 10.4 | -- | -- | -- | -- |
| 131.71 | 0.537 | 2.99 | -0.398 | 0.117 | -- | -- | -- | -0.0553 | 11.1 | -- | -- | -- | -- |
| 132.37 | 0.536 | 2.99 | -0.408 | -- | 0.143 | -- | -- | -0.0514 | -- | 29.8 | 6 | -- | -- |
| 135.88 | 0.543 | 2.98 | -- | 0.122 | 0.0459 | -- | -- | -0.0118 | 10.8 | 29.7 | 6 | -- | -- |
| 132.56 | 0.538 | 2.99 | -0.401 | -- | -- | -- | -- | -0.0563 | -- | -- | -- | -- | -- |
| 135.89 | 0.545 | 2.98 | -- | 0.12 | -- | -- | -- | -0.011 | 11.3 | -- | -- | -- | -- |
| 136.73 | 0.545 | 2.98 | -- | -- | 0.0858 | -- | -- | -0.00818 | -- | 29.83 | 6 | -- | -- |
| 136.8 | 0.546 | 2.98 | -- | -- | -- | -- | -- | -0.0118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.69 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 113.39 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 4 | 113.39 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 7 | 114.26 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 8 | 114.32 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 12 | 114.44 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 14 | 117.26 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 2 |
| 21 | 119.42 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 3 |
| 25 | 119.43 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 3 |
| 27 | 119.44 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 33 | 119.44 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 57 | 120.82 | radiation | 10.0 | 270 | < th | dose independent | rect. | 8 | 5 |
| 60 | 121.13 | radiation | 10.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 74 | 121.59 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 6 |
| 105 | 122.18 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 116 | 122.36 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 117 | 122.38 | radiation | 20.0 | 90 | < th | dose independent | rect. | 10 | 17 |
| 121 | 122.49 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 10 | 6 |
| 146 | 123.03 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 148 | 123.03 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 216 | 123.76 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 261 | 124.05 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 270 | 124.13 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 280 | 124.19 | temperature | 30.0 | 270 | > th | dose independent | rect. | 11 | 1 |
| 293 | 124.29 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 1 | 1 |
| 297 | 124.31 | radiation | 20.0 | 270 | < th | dose independent | rect. | 21 | 16 |
| 314 | 124.43 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 315 | 124.43 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 317 | 124.43 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 319 | 124.44 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 363 | 124.61 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 368 | 124.62 | temperature | 30.0 | 10 | > th | dose independent | rect. | 18 | 18 |
| 450 | 124.85 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 461 | 124.89 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 1 | 2 |
| 484 | 124.99 | radiation | 40.0 | 30 | < th | dose independent | rect. | 11 | 16 |
| 536 | 125.13 | radiation | 20.0 | 270 | < th | dose independent | rect. | 19 | 20 |
| 830 | 125.89 | temperature | 30.0 | 30 | > th | dose independent | sin | 7 | NA |
| 831 | 125.89 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 3 |
| 946 | 126.05 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 16 |