Os05g0568200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Typical P-type R2R3 Myb protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os05g0568200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Typical P-type R2R3 Myb protein (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.76 | 0.39 | 2.89 | -0.139 | 0.224 | 0.14 | -0.776 | -1.04 | 0.00555 | 11.3 | 28.66 | 34 | -- | -- |
| 70.56 | 0.391 | 2.88 | -0.12 | 0.276 | 0.26 | -0.257 | -- | 0.0224 | 10.6 | 39.4 | 104 | -- | -- |
| 70.39 | 0.391 | 2.89 | -0.155 | 0.252 | 0.143 | -- | -0.609 | 0.00368 | 10.7 | 28.25 | 34 | -- | -- |
| 70.78 | 0.392 | 2.89 | -0.128 | 0.263 | 0.299 | -- | -- | 0.0251 | 10.5 | 39.93 | 104 | -- | -- |
| 73.05 | 0.4 | 2.9 | -0.16 | -- | 0.0116 | -- | -0.642 | -0.00556 | -- | 34.94 | 30 | -- | -- |
| 72.26 | 0.399 | 2.9 | -0.115 | 0.188 | -- | -0.189 | -- | -0.00235 | 9.77 | -- | -- | -- | -- |
| 72.38 | 0.398 | 2.9 | -0.123 | 0.19 | -- | -- | -- | -0.00302 | 9.52 | -- | -- | -- | -- |
| 74.03 | 0.401 | 2.9 | -0.141 | -- | 0.164 | -- | -- | 0.00497 | -- | 49.39 | 179 | -- | -- |
| 71.28 | 0.393 | 2.89 | -- | 0.262 | 0.298 | -- | -- | 0.026 | 10.6 | 39.8 | 104 | -- | -- |
| 74.51 | 0.403 | 2.9 | -0.124 | -- | -- | -- | -- | -0.00251 | -- | -- | -- | -- | -- |
| 72.78 | 0.399 | 2.89 | -- | 0.19 | -- | -- | -- | 0.0106 | 9.57 | -- | -- | -- | -- |
| 73.33 | 0.399 | 2.9 | -- | -- | 0.167 | -- | -- | 0.00752 | -- | 37.01 | 838 | -- | -- |
| 74.92 | 0.404 | 2.9 | -- | -- | -- | -- | -- | 0.0113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.86 | radiation | 20.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 2 | 65.13 | wind | 1.0 | 720 | < th | dose dependent | rect. | 24 | 2 |
| 4 | 65.31 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 18 | 66.53 | wind | 1.0 | 720 | < th | dose independent | rect. | 24 | 2 |
| 32 | 66.96 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 46 | 67.13 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 9 |
| 49 | 67.17 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 66 | 67.39 | radiation | 30.0 | 30 | < th | dose independent | rect. | 11 | 10 |
| 71 | 67.43 | radiation | 30.0 | 90 | < th | dose independent | rect. | 19 | 17 |
| 81 | 67.61 | radiation | 30.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 87 | 67.65 | radiation | 30.0 | 30 | < th | dose independent | rect. | 11 | 5 |
| 130 | 67.90 | radiation | 30.0 | 90 | < th | dose independent | rect. | 10 | 13 |
| 153 | 68.03 | wind | 1.0 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 164 | 68.07 | wind | 1.0 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 165 | 68.07 | radiation | 30.0 | 30 | < th | dose independent | rect. | 11 | 18 |
| 184 | 68.14 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 9 |
| 194 | 68.17 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 19 | 17 |
| 201 | 68.20 | radiation | 30.0 | 30 | < th | dose independent | sin | 1 | NA |
| 205 | 68.20 | radiation | 30.0 | 30 | < th | dose independent | rect. | 11 | 22 |
| 224 | 68.27 | radiation | 20.0 | 270 | < th | dose independent | rect. | 7 | 22 |
| 238 | 68.33 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 21 |
| 255 | 68.37 | wind | 5.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 260 | 68.38 | radiation | 30.0 | 90 | < th | dose independent | rect. | 17 | 23 |
| 277 | 68.42 | radiation | 30.0 | 30 | < th | dose independent | rect. | 14 | 23 |
| 279 | 68.42 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 2 |
| 291 | 68.44 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 8 | 8 |
| 320 | 68.51 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 2 |
| 327 | 68.52 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 9 | 2 |
| 329 | 68.52 | radiation | 30.0 | 30 | < th | dose independent | rect. | 6 | 7 |
| 333 | 68.52 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 365 | 68.57 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 2 |
| 412 | 68.63 | wind | 1.0 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 461 | 68.68 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 483 | 68.71 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 9 |
| 493 | 68.72 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 505 | 68.74 | humidity | 60.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 524 | 68.76 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 531 | 68.78 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 547 | 68.80 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 558 | 68.81 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 570 | 68.82 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 574 | 68.83 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 2 | 1 |
| 578 | 68.83 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 11 | 1 |
| 579 | 68.83 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 599 | 68.85 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 604 | 68.86 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 622 | 68.88 | radiation | 30.0 | 30 | < th | dose independent | no | NA | NA |
| 638 | 68.89 | radiation | 20.0 | 270 | < th | dose independent | rect. | 8 | 9 |
| 648 | 68.90 | radiation | 30.0 | 30 | < th | dose independent | rect. | 6 | 10 |
| 653 | 68.90 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 14 | 21 |
| 662 | 68.91 | radiation | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 717 | 68.95 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 9 |
| 727 | 68.96 | wind | 5.0 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 752 | 68.99 | humidity | 90.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 760 | 69.00 | radiation | 20.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 778 | 69.01 | radiation | 30.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 783 | 69.01 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 10 | 11 |
| 791 | 69.02 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 802 | 69.04 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 815 | 69.05 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 21 |
| 846 | 69.08 | radiation | 30.0 | 30 | > th | dose independent | rect. | 7 | 7 |
| 873 | 69.08 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 18 | 23 |
| 888 | 69.10 | radiation | 30.0 | 30 | > th | dose independent | sin | 3 | NA |
| 928 | 69.13 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 6 | 2 |
| 931 | 69.13 | radiation | 30.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 946 | 69.13 | radiation | 30.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 947 | 69.13 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 6 | 2 |
| 972 | 69.15 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 10 |
| 998 | 69.16 | wind | 1.0 | 1440 | > th | dose independent | rect. | 24 | 2 |