Os05g0567100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-).
FiT-DB / Search/ Help/ Sample detail
|
Os05g0567100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.97 | 0.266 | 13.4 | -0.0192 | 0.0462 | 0.798 | -0.637 | 1.66 | 0.137 | 21.2 | 5.318 | 663 | -- | -- |
| 33.36 | 0.269 | 13.3 | -0.0499 | 0.0192 | 0.607 | -0.36 | -- | 0.173 | 20.9 | 4.703 | 693 | -- | -- |
| 33.11 | 0.268 | 13.4 | 0.000642 | 0.0551 | 0.799 | -- | 1.21 | 0.144 | 21.2 | 5.499 | 691 | -- | -- |
| 33.72 | 0.27 | 13.4 | -0.0288 | 0.0233 | 0.608 | -- | -- | 0.149 | 21.2 | 4.752 | 693 | -- | -- |
| 33.22 | 0.268 | 13.4 | 0.0146 | -- | 0.856 | -- | 1.25 | 0.138 | -- | 5.5 | 691 | -- | -- |
| 37.1 | 0.286 | 13.4 | -0.191 | 0.21 | -- | -0.584 | -- | 0.144 | 21 | -- | -- | -- | -- |
| 38.27 | 0.29 | 13.4 | -0.172 | 0.211 | -- | -- | -- | 0.144 | 21.2 | -- | -- | -- | -- |
| 33.74 | 0.271 | 13.4 | -0.0201 | -- | 0.607 | -- | -- | 0.151 | -- | 4.77 | 693 | -- | -- |
| 33.72 | 0.27 | 13.4 | -- | 0.0256 | 0.592 | -- | -- | 0.153 | 21.4 | 4.756 | 693 | -- | -- |
| 40.86 | 0.299 | 13.4 | -0.171 | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
| 39.04 | 0.292 | 13.4 | -- | 0.211 | -- | -- | -- | 0.163 | 21.2 | -- | -- | -- | -- |
| 33.75 | 0.271 | 13.4 | -- | -- | 0.567 | -- | -- | 0.144 | -- | 4.495 | 671 | -- | -- |
| 41.63 | 0.301 | 13.3 | -- | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.48 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 7 | 25.57 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 9 | 25.60 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 10 | 25.62 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 15 | 25.67 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 16 | 25.68 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 23 | 25.73 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 20 |
| 28 | 25.77 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 30 | 25.79 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 34 | 25.80 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 58 | 25.90 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 16 |
| 68 | 25.96 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 76 | 25.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 289 | 26.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 292 | 26.65 | wind | 7.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 300 | 26.66 | wind | 5.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 303 | 26.67 | wind | 5.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 323 | 26.71 | wind | 5.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 347 | 26.77 | wind | 7.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 427 | 27.14 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 17 |
| 436 | 27.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 437 | 27.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 17 |
| 637 | 27.47 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 16 |
| 762 | 27.61 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 816 | 27.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 12 |
| 887 | 27.70 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 942 | 27.74 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 984 | 27.76 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 12 |