Os05g0566700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Homeobox protein B-H1 (Homeobox BarH1 protein).
FiT-DB / Search/ Help/ Sample detail
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Os05g0566700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Homeobox protein B-H1 (Homeobox BarH1 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.17 | 0.391 | 9.06 | -1.56 | 0.876 | -0.857 | 0.44 | -1.37 | -0.175 | 0.973 | 25 | 80 | -- | -- |
| 71.66 | 0.394 | 9.08 | -1.77 | 0.836 | -0.727 | 0.0897 | -- | -0.217 | 0.733 | 25.08 | 80 | -- | -- |
| 69.75 | 0.389 | 9.06 | -1.62 | 0.869 | -0.819 | -- | -1.04 | -0.182 | 0.876 | 24.9 | 68 | -- | -- |
| 71.55 | 0.394 | 9.08 | -1.77 | 0.85 | -0.718 | -- | -- | -0.209 | 0.883 | 25.1 | 77 | -- | -- |
| 99.87 | 0.465 | 9.05 | -1.58 | -- | -0.861 | -- | -1.19 | -0.182 | -- | 26.9 | 940 | -- | -- |
| 79.14 | 0.417 | 9.05 | -1.59 | 0.724 | -- | -0.00236 | -- | -0.0725 | 0.688 | -- | -- | -- | -- |
| 79.14 | 0.417 | 9.05 | -1.59 | 0.724 | -- | -- | -- | -0.0725 | 0.689 | -- | -- | -- | -- |
| 101.42 | 0.469 | 9.07 | -1.79 | -- | -0.789 | -- | -- | -0.233 | -- | 27.5 | 904 | -- | -- |
| 145.84 | 0.562 | 9.01 | -- | 0.681 | 0.0664 | -- | -- | 0.115 | 0.547 | 32.22 | 6 | -- | -- |
| 111.95 | 0.494 | 9.03 | -1.57 | -- | -- | -- | -- | -0.0597 | -- | -- | -- | -- | -- |
| 145.9 | 0.565 | 9.01 | -- | 0.7 | -- | -- | -- | 0.105 | 0.582 | -- | -- | -- | -- |
| 167.31 | 0.602 | 8.97 | -- | -- | 0.669 | -- | -- | 0.216 | -- | 30.62 | 14 | -- | -- |
| 176.6 | 0.62 | 8.99 | -- | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.09 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 23 | 66.76 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 28 | 66.79 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 41 | 67.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 72 | 67.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 82 | 67.45 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 92 | 67.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 99 | 67.64 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 105 | 67.76 | temperature | 15 | 90 | > th | dose dependent | rect. | 18 | 22 |
| 125 | 67.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 133 | 68.07 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 22 |
| 134 | 68.08 | temperature | 15 | 90 | > th | dose dependent | sin | 7 | NA |
| 145 | 68.19 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 146 | 68.20 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 148 | 68.22 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 151 | 68.25 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 8 |
| 170 | 68.35 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 21 |
| 176 | 68.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 187 | 68.44 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 193 | 68.45 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 195 | 68.46 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 196 | 68.46 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 217 | 68.56 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 19 |
| 220 | 68.57 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 240 | 68.67 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 250 | 68.70 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 22 |
| 258 | 68.75 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 10 |
| 276 | 68.84 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 10 | 19 |
| 280 | 68.86 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 294 | 68.92 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 348 | 69.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 355 | 69.11 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 374 | 69.18 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 398 | 69.23 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 406 | 69.27 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 408 | 69.27 | radiation | 30 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 413 | 69.27 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 418 | 69.29 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 426 | 69.30 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 431 | 69.30 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 7 | 22 |
| 443 | 69.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 444 | 69.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 445 | 69.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 451 | 69.34 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 5 | 14 |
| 453 | 69.34 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 458 | 69.36 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 17 |
| 464 | 69.37 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 501 | 69.46 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 516 | 69.49 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 566 | 69.60 | wind | 9 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 591 | 69.63 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 635 | 69.73 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 651 | 69.77 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 17 |
| 655 | 69.78 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 660 | 69.79 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 19 | 10 |
| 687 | 69.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 692 | 69.86 | wind | 9 | 14400 | > th | dose independent | sin | 5 | NA |
| 695 | 69.86 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 19 |
| 732 | 69.92 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 5 | 16 |
| 750 | 69.94 | wind | 9 | 14400 | < th | dose independent | sin | 4 | NA |
| 777 | 69.98 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 882 | 70.15 | radiation | 10 | 10 | < th | dose independent | rect. | 5 | 13 |
| 915 | 70.19 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 922 | 70.20 | humidity | 70 | 10 | > th | dose independent | rect. | 18 | 11 |
| 928 | 70.21 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 938 | 70.22 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 940 | 70.22 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 15 |
| 946 | 70.23 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 6 |
| 949 | 70.23 | radiation | 30 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 953 | 70.24 | wind | 9 | 14400 | > th | dose dependent | sin | 4 | NA |
| 981 | 70.28 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 16 | 15 |
| 992 | 70.29 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 10 |