Os05g0564000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0564000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.46 | 0.617 | 5.59 | 1.17 | 0.343 | -1.3 | 0.217 | 0.596 | 0.192 | 6.75 | 79.54 | 1334 | -- | -- |
| 172.78 | 0.612 | 5.59 | 1.12 | 0.344 | -1.27 | 0.239 | -- | 0.181 | 6.71 | 79.43 | 1333 | -- | -- |
| 172.58 | 0.612 | 5.59 | 1.17 | 0.343 | -1.3 | -- | 0.616 | 0.192 | 6.81 | 79.56 | 1333 | -- | -- |
| 172.92 | 0.612 | 5.59 | 1.12 | 0.344 | -1.27 | -- | -- | 0.181 | 6.79 | 79.5 | 1333 | -- | -- |
| 178.7 | 0.623 | 5.59 | 1.18 | -- | -1.25 | -- | 0.647 | 0.193 | -- | 79.01 | 1324 | -- | -- |
| 193.19 | 0.652 | 5.61 | 1.08 | 0.303 | -- | 0.139 | -- | 0.105 | 7.94 | -- | -- | -- | -- |
| 193.24 | 0.651 | 5.61 | 1.08 | 0.303 | -- | -- | -- | 0.105 | 7.97 | -- | -- | -- | -- |
| 179.06 | 0.623 | 5.6 | 1.12 | -- | -1.21 | -- | -- | 0.182 | -- | 79 | 1330 | -- | -- |
| 206.54 | 0.669 | 5.62 | -- | 0.335 | -1.21 | -- | -- | 0.109 | 6.47 | 79 | 1332 | -- | -- |
| 198.26 | 0.658 | 5.61 | 1.09 | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
| 224.12 | 0.7 | 5.63 | -- | 0.311 | -- | -- | -- | -0.0156 | 7.72 | -- | -- | -- | -- |
| 206.94 | 0.67 | 5.62 | -- | -- | -1.15 | -- | -- | 0.0978 | -- | 84 | 2060 | -- | -- |
| 229.34 | 0.707 | 5.64 | -- | -- | -- | -- | -- | -0.0116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.40 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 3 | 170.17 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 4 | 170.27 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 5 | 170.29 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 11 | 170.62 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 14 | 170.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 15 | 170.71 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 22 | 170.87 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 28 | 170.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 30 | 171.10 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 36 | 171.28 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 62 | 171.62 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 88 | 171.98 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 106 | 172.14 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 129 | 172.34 | wind | 3.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 139 | 172.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 175 | 172.66 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 176 | 172.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 236 | 173.02 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 245 | 173.06 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 282 | 173.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 283 | 173.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 285 | 173.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 326 | 173.44 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 341 | 173.49 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 348 | 173.52 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 394 | 173.64 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 395 | 173.64 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 438 | 173.79 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 20 |
| 449 | 173.81 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 457 | 173.85 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 550 | 174.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 552 | 174.09 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 553 | 174.09 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 558 | 174.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 566 | 174.13 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 590 | 174.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 593 | 174.19 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 631 | 174.26 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 633 | 174.26 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 669 | 174.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 671 | 174.35 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 677 | 174.35 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 730 | 174.41 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 784 | 174.48 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 21 |
| 786 | 174.48 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 822 | 174.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 854 | 174.57 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 946 | 174.69 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 990 | 174.77 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 999 | 174.78 | wind | 1.0 | 14400 | > th | dose dependent | sin | 7 | NA |