Os05g0561900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0561900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.29 | 0.617 | 7.09 | 1.5 | 1.07 | -2.82 | 0.264 | 3.05 | 0.314 | 8.31 | 19.24 | 1160 | 4.15 | -- |
| 181.11 | 0.627 | 7.2 | 0.686 | 0.979 | -2.62 | 0.397 | -- | 0.0716 | 8.48 | 18.73 | 1176 | 3.54 | -- |
| 172.44 | 0.612 | 7.1 | 1.52 | 1.04 | -2.81 | -- | 3.04 | 0.313 | 8.42 | 19.12 | 1161 | 3.99 | -- |
| 181.35 | 0.627 | 7.19 | 0.709 | 0.987 | -2.66 | -- | -- | 0.0852 | 8.55 | 18.77 | 1178 | 3.75 | -- |
| 195.59 | 0.651 | 7.08 | 1.89 | -- | -2.88 | -- | 4.19 | 0.399 | -- | 19.13 | 1174 | 0.43 | -- |
| 360.22 | 0.89 | 7.36 | -0.166 | 0.734 | -- | 0.41 | -- | -0.641 | 7.94 | -- | -- | -- | -- |
| 360.71 | 0.889 | 7.36 | -0.155 | 0.733 | -- | -- | -- | -0.641 | 7.99 | -- | -- | -- | -- |
| 203.75 | 0.665 | 7.26 | 0.809 | -- | -2.66 | -- | -- | 0.0359 | -- | 19.94 | 1128 | 0.421 | -- |
| 192.84 | 0.647 | 7.22 | -- | 0.962 | -2.46 | -- | -- | -0.0324 | 8.58 | 19.19 | 1138 | 3.55 | -- |
| 390.03 | 0.923 | 7.38 | -0.148 | -- | -- | -- | -- | -0.632 | -- | -- | -- | -- | -- |
| 361.34 | 0.889 | 7.36 | -- | 0.732 | -- | -- | -- | -0.624 | 8 | -- | -- | -- | -- |
| 213.58 | 0.681 | 7.26 | -- | -- | -2.51 | -- | -- | -0.118 | -- | 19 | 1142 | 0.0497 | -- |
| 390.61 | 0.922 | 7.37 | -- | -- | -- | -- | -- | -0.615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 172.65 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 3 | 176.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 26 | 179.30 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 36 | 180.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 54 | 181.02 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 65 | 181.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 67 | 181.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 80 | 181.68 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 112 | 182.55 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 130 | 182.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 151 | 183.25 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 152 | 183.27 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 156 | 183.32 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 184 | 183.76 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 189 | 183.81 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 356 | 185.28 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 394 | 185.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 428 | 185.75 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 440 | 185.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 465 | 185.96 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 575 | 186.55 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 647 | 186.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 848 | 187.98 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 898 | 188.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 938 | 188.44 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 966 | 188.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |