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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0559300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.07 (0.013) R2 : 0.000631
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0147 (0.0275) R2dN8 : 0.000815 R2N8 : 0.000631
σ : 0.246
deviance : 27.68
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.96 0.239 3.07 0.0707 0.108 -0.0779 -0.0805 -0.763 0.0141 7.96 70.33 5903 -- --
26.44 0.239 3.09 0.0438 0.108 -0.163 -0.112 -- -0.0622 7.5 83.03 7297 -- --
25.97 0.237 3.07 0.0689 0.108 -0.0737 -- -0.775 0.0143 8.11 70.09 5991 -- --
26.46 0.24 3.08 0.0466 0.107 -0.173 -- -- -0.061 7.93 83.12 7297 -- --
26.62 0.24 3.07 0.0696 -- -0.076 -- -0.763 0.0155 -- 70 5903 -- --
27.02 0.244 3.07 0.022 0.107 -- -0.098 -- 0.0154 7.74 -- -- -- --
27.05 0.244 3.07 0.0199 0.107 -- -- -- 0.0157 8.05 -- -- -- --
27.09 0.242 3.09 0.0476 -- -0.171 -- -- -0.0594 -- 83.21 7265 -- --
26.51 0.24 3.08 -- 0.107 -0.164 -- -- -0.0618 7.92 83.13 7297 -- --
27.67 0.246 3.07 0.0209 -- -- -- -- 0.0171 -- -- -- -- --
27.06 0.243 3.07 -- 0.107 -- -- -- 0.0135 8.04 -- -- -- --
27.15 0.243 3.09 -- -- -0.162 -- -- -0.0602 -- 83.49 7265 -- --
27.68 0.246 3.07 -- -- -- -- -- 0.0147 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.34 radiation 10.0 10 > th dose independent rect. 6 1
27 22.34 radiation 10.0 10 > th dose dependent rect. 6 1
55 23.46 wind 3.0 30 < th dose dependent rect. 6 1
56 23.54 atmosphere 1005.0 30 > th dose dependent rect. 6 1
61 23.84 humidity 80.0 30 > th dose dependent rect. 6 1
63 24.08 temperature 30.0 30 < th dose dependent rect. 6 1
70 24.29 wind 3.0 30 < th dose independent rect. 6 1
76 24.46 temperature 20.0 30 > th dose independent rect. 6 1
79 24.50 wind 9.0 1440 < th dose independent rect. 7 1
80 24.50 temperature 10.0 1440 > th dose independent rect. 7 1
84 24.50 temperature 30.0 1440 < th dose independent rect. 7 1
88 24.50 humidity 50.0 1440 > th dose independent rect. 7 1
93 24.50 atmosphere 995.0 1440 > th dose independent rect. 7 1
94 24.50 atmosphere 1015.0 1440 < th dose independent rect. 7 1
95 24.50 temperature 10.0 1440 > th dose independent rect. 8 23
98 24.52 humidity 80.0 30 > th dose independent rect. 6 1
104 24.54 temperature 10.0 30 > th dose independent rect. 6 1
106 24.54 temperature 30.0 30 < th dose independent rect. 6 1
107 24.54 humidity 50.0 30 > th dose independent rect. 6 1
110 24.54 atmosphere 995.0 30 > th dose independent rect. 6 1
111 24.54 atmosphere 1005.0 30 > th dose independent rect. 6 1
112 24.54 atmosphere 1015.0 30 < th dose independent rect. 6 1
113 24.54 radiation 20.0 30 < th dose independent rect. 6 1
116 24.54 precipitation 0.1 30 < th dose independent rect. 6 1
117 24.54 temperature 10.0 30 > th dose independent rect. 7 23
118 24.54 precipitation 0.1 30 < th dose dependent rect. 6 1
119 24.55 humidity 90.0 30 < th dose independent rect. 6 1
121 24.58 wind 1.0 30 > th dose independent rect. 6 1
138 24.61 humidity 90.0 90 < th dose independent rect. 2 5
140 24.69 temperature 10.0 30 > th dose dependent rect. 6 1
143 24.71 radiation 20.0 10 < th dose dependent rect. 6 1
193 24.91 atmosphere 1005.0 10 > th dose dependent rect. 2 6
204 25.04 atmosphere 1000.0 90 > th dose independent rect. 7 23
210 25.09 humidity 90.0 90 < th dose dependent rect. 2 5
212 25.11 wind 9.0 30 < th dose independent rect. 7 23
213 25.11 temperature 30.0 30 < th dose independent rect. 7 23
236 25.26 precipitation 0.1 30 < th dose independent rect. 7 23
237 25.26 precipitation 0.1 30 < th dose dependent rect. 7 23
240 25.28 atmosphere 1015.0 30 < th dose dependent rect. 6 1
269 25.34 atmosphere 1000.0 10 > th dose independent rect. 8 22
275 25.35 atmosphere 1005.0 270 > th dose dependent rect. 3 1
286 25.40 humidity 90.0 10 < th dose dependent rect. 6 1
288 25.41 precipitation 0.1 720 < th dose independent rect. 15 16
289 25.41 precipitation 0.1 720 < th dose dependent rect. 15 16
300 25.47 atmosphere 995.0 720 > th dose independent rect. 7 8
301 25.47 precipitation 0.1 720 < th dose independent rect. 19 8
304 25.47 precipitation 0.1 720 < th dose dependent rect. 19 8
305 25.49 radiation 10.0 30 > th dose independent sin 11 NA
337 25.55 humidity 50.0 90 > th dose independent rect. 7 23
348 25.57 atmosphere 995.0 720 > th dose independent rect. 3 16
353 25.59 atmosphere 995.0 720 > th dose independent rect. 15 16
382 25.62 wind 9.0 720 < th dose independent rect. 19 8
399 25.63 humidity 80.0 14400 < th dose dependent rect. 6 3
403 25.64 temperature 10.0 720 > th dose independent rect. 7 8
404 25.64 atmosphere 1015.0 720 < th dose independent rect. 7 8
405 25.64 temperature 10.0 720 > th dose independent rect. 15 16
416 25.65 temperature 10.0 720 > th dose independent rect. 19 8
417 25.65 temperature 30.0 720 < th dose independent rect. 19 8
418 25.65 humidity 50.0 720 > th dose independent rect. 19 8
419 25.65 atmosphere 995.0 720 > th dose independent rect. 19 8
420 25.65 radiation 1.0 720 < th dose independent rect. 19 8
426 25.65 temperature 10.0 720 > th dose independent rect. 3 16
434 25.65 radiation 1.0 720 < th dose dependent rect. 19 8
445 25.67 atmosphere 1000.0 720 > th dose independent rect. 21 14
448 25.68 humidity 90.0 720 < th dose independent rect. 2 5
449 25.68 temperature 30.0 30 < th dose independent rect. 8 11
464 25.71 humidity 90.0 720 < th dose independent rect. 3 1
480 25.73 atmosphere 1000.0 720 > th dose independent rect. 23 10
485 25.73 wind 1.0 14400 < th dose dependent rect. 6 1
497 25.73 atmosphere 995.0 30 > th dose dependent rect. 8 11
504 25.75 atmosphere 1000.0 90 > th dose independent rect. 8 11
510 25.75 atmosphere 995.0 30 > th dose dependent rect. 8 22
511 25.76 humidity 70.0 14400 > th dose independent rect. 20 13
516 25.77 humidity 70.0 14400 > th dose independent rect. 6 3
521 25.77 atmosphere 995.0 720 > th dose independent rect. 13 6
528 25.77 atmosphere 995.0 720 > th dose independent rect. 7 18
548 25.79 humidity 90.0 30 < th dose independent rect. 3 1
552 25.79 precipitation 0.1 720 < th dose independent rect. 13 6
558 25.79 precipitation 0.1 720 < th dose dependent rect. 13 6
568 25.80 temperature 30.0 30 < th dose independent rect. 8 7
577 25.80 temperature 30.0 10 < th dose independent rect. 8 18
579 25.80 atmosphere 995.0 720 > th dose independent rect. 21 22
580 25.80 wind 1.0 30 > th dose dependent rect. 6 1
581 25.80 humidity 80.0 90 < th dose dependent rect. 2 1
582 25.80 humidity 90.0 10 < th dose dependent rect. 3 1
587 25.81 humidity 70.0 14400 < th dose independent rect. 6 4
592 25.81 precipitation 0.1 720 < th dose independent rect. 7 8
604 25.81 precipitation 0.1 720 < th dose dependent rect. 7 8
608 25.82 humidity 90.0 4320 > th dose independent rect. 3 7
611 25.82 radiation 40.0 90 > th dose independent rect. 14 21
629 25.84 humidity 90.0 4320 < th dose independent rect. 3 7
644 25.85 humidity 90.0 4320 > th dose independent rect. 3 11
646 25.85 temperature 30.0 10 > th dose dependent rect. 11 1
659 25.86 atmosphere 995.0 720 > th dose independent rect. 11 10
660 25.86 wind 1.0 90 > th dose independent rect. 8 11
664 25.86 wind 1.0 14400 < th dose dependent rect. 4 3
673 25.87 humidity 90.0 4320 < th dose independent rect. 3 11
674 25.87 atmosphere 995.0 720 > th dose independent rect. 9 14
675 25.87 precipitation 0.1 720 < th dose independent rect. 5 16
677 25.87 atmosphere 995.0 720 > th dose dependent rect. 8 1
683 25.87 precipitation 0.1 720 < th dose dependent rect. 5 16
684 25.88 temperature 30.0 10 > th dose independent rect. 11 1
686 25.88 wind 1.0 720 > th dose independent rect. 13 6
687 25.88 atmosphere 1000.0 720 > th dose independent rect. 21 8
692 25.88 wind 7.0 90 < th dose independent rect. 19 13
693 25.88 precipitation 0.1 720 < th dose independent rect. 19 18
702 25.88 precipitation 0.1 720 < th dose dependent rect. 19 18
703 25.89 temperature 30.0 90 > th dose independent rect. 11 1
704 25.89 humidity 60.0 4320 < th dose independent rect. 12 1
705 25.89 wind 7.0 720 < th dose independent rect. 19 2
708 25.89 wind 9.0 720 < th dose independent rect. 1 6
709 25.89 temperature 10.0 720 > th dose independent rect. 13 6
712 25.89 atmosphere 1015.0 720 < th dose independent rect. 13 6
720 25.89 temperature 10.0 720 > th dose independent rect. 19 18
721 25.89 atmosphere 995.0 720 > th dose independent rect. 19 18
728 25.89 atmosphere 995.0 30 > th dose dependent rect. 19 13
729 25.90 humidity 70.0 4320 > th dose independent rect. 10 1
730 25.90 humidity 70.0 4320 < th dose independent rect. 10 1
731 25.90 wind 1.0 720 > th dose independent rect. 7 2
733 25.90 humidity 80.0 90 < th dose independent rect. 24 3
735 25.90 temperature 10.0 720 > th dose independent rect. 1 6
736 25.90 temperature 30.0 720 < th dose independent rect. 1 6
737 25.90 humidity 50.0 720 > th dose independent rect. 1 6
739 25.90 atmosphere 995.0 720 > th dose independent rect. 1 6
740 25.90 radiation 40.0 720 < th dose independent rect. 1 6
743 25.90 precipitation 0.1 90 < th dose independent rect. 19 13
744 25.90 temperature 10.0 720 > th dose independent rect. 7 18
745 25.90 atmosphere 1000.0 30 > th dose independent rect. 8 18
746 25.90 wind 1.0 30 > th dose independent rect. 8 22
756 25.90 precipitation 0.1 90 < th dose dependent rect. 19 13
773 25.91 precipitation 0.1 720 < th dose independent rect. 1 6
788 25.91 precipitation 0.1 720 < th dose independent rect. 9 22
794 25.91 precipitation 0.1 720 < th dose dependent rect. 1 6
795 25.91 humidity 70.0 4320 > th dose dependent rect. 3 7
796 25.91 humidity 70.0 4320 > th dose dependent rect. 2 9
799 25.91 precipitation 0.1 720 < th dose dependent rect. 9 22
801 25.92 radiation 40.0 90 > th dose independent rect. 9 2
808 25.92 temperature 10.0 90 > th dose independent rect. 8 11
809 25.92 temperature 10.0 1440 > th dose independent rect. 9 11
812 25.92 atmosphere 1015.0 90 < th dose independent rect. 8 11
813 25.92 temperature 10.0 90 > th dose independent rect. 19 13
814 25.92 temperature 10.0 1440 > th dose independent rect. 20 13
817 25.92 temperature 30.0 90 < th dose independent rect. 19 13
818 25.92 humidity 50.0 90 > th dose independent rect. 19 13
820 25.92 humidity 50.0 1440 > th dose independent rect. 20 13
822 25.92 atmosphere 995.0 90 > th dose independent rect. 19 13
824 25.92 wind 9.0 720 < th dose independent rect. 19 18
825 25.92 humidity 90.0 30 < th dose independent rect. 3 18
827 25.92 humidity 60.0 14400 < th dose dependent rect. 12 1
833 25.92 wind 9.0 30 < th dose dependent rect. 19 13
834 25.93 wind 3.0 270 > th dose independent rect. 3 1
835 25.93 humidity 60.0 4320 > th dose independent rect. 12 1
836 25.93 humidity 90.0 4320 < th dose independent rect. 8 1
844 25.93 humidity 50.0 90 > th dose independent rect. 8 11
847 25.93 atmosphere 995.0 720 > th dose independent rect. 9 22
889 25.94 temperature 30.0 4320 < th dose independent rect. 3 6
899 25.94 precipitation 0.1 90 < th dose independent rect. 8 11
900 25.94 temperature 25.0 10 > th dose independent rect. 20 12
915 25.94 humidity 90.0 10 < th dose dependent rect. 3 5
925 25.94 precipitation 0.1 90 < th dose dependent rect. 8 11
932 25.95 radiation 40.0 90 < th dose independent rect. 19 13
934 25.95 atmosphere 995.0 720 > th dose independent rect. 5 16
936 25.95 radiation 40.0 90 < th dose independent rect. 11 21
948 25.95 humidity 60.0 4320 > th dose dependent rect. 23 13
949 25.96 radiation 10.0 30 < th dose independent sin 11 NA
963 25.96 atmosphere 995.0 720 > th dose independent rect. 17 16
964 25.96 radiation 40.0 720 < th dose independent rect. 15 16
974 25.96 radiation 40.0 720 < th dose dependent rect. 1 6
986 25.97 wind 1.0 720 > th dose independent rect. 19 2
989 25.97 precipitation 0.1 720 < th dose independent rect. 19 2
990 25.97 wind 1.0 14400 < th dose independent rect. 4 3
992 25.97 atmosphere 1005.0 10 > th dose independent rect. 8 7
993 25.97 humidity 60.0 720 > th dose independent rect. 23 10
995 25.97 wind 9.0 90 < th dose independent rect. 8 11