Os05g0556300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1298 domain containing protein.
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Os05g0556300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1298 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181.78 | 0.633 | 6.7 | 0.62 | 2 | 1.69 | -0.192 | 1.79 | 0.3 | 6.26 | 20.1 | 1512 | -- | -- |
| 186.45 | 0.636 | 6.65 | 0.921 | 2.01 | 1.41 | -0.254 | -- | 0.39 | 6.28 | 20.41 | 1554 | -- | -- |
| 181.61 | 0.628 | 6.7 | 0.605 | 2 | 1.67 | -- | 1.79 | 0.301 | 6.25 | 20.3 | 1510 | -- | -- |
| 184.5 | 0.633 | 6.65 | 0.909 | 2.01 | 1.37 | -- | -- | 0.387 | 6.26 | 20.7 | 1540 | -- | -- |
| 383.07 | 0.912 | 6.75 | 0.592 | -- | 1.6 | -- | 1.9 | 0.348 | -- | 20.6 | 1893 | -- | -- |
| 226.99 | 0.706 | 6.72 | 0.335 | 1.99 | -- | -0.00441 | -- | 0.0631 | 6.29 | -- | -- | -- | -- |
| 226.99 | 0.706 | 6.72 | 0.335 | 1.99 | -- | -- | -- | 0.0631 | 6.29 | -- | -- | -- | -- |
| 385.76 | 0.915 | 6.67 | 1 | -- | 1.33 | -- | -- | 0.472 | -- | 21.1 | 1883 | -- | -- |
| 204.52 | 0.666 | 6.66 | -- | 2.06 | 1.26 | -- | -- | 0.319 | 6.17 | 21.2 | 1532 | -- | -- |
| 432.54 | 0.972 | 6.76 | 0.388 | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
| 229.94 | 0.709 | 6.73 | -- | 1.99 | -- | -- | -- | 0.0258 | 6.28 | -- | -- | -- | -- |
| 300.47 | 0.807 | 6.67 | -- | -- | 1.4 | -- | -- | 0.506 | -- | 25.79 | 361 | -- | -- |
| 436.52 | 0.975 | 6.77 | -- | -- | -- | -- | -- | 0.0631 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 2 | 170.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 5 |
| 3 | 170.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 6 | 170.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 114 | 175.52 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 123 | 175.66 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 271 | 178.72 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 338 | 179.90 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 386 | 180.69 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 432 | 181.23 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 439 | 181.31 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 462 | 181.54 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 6 |
| 484 | 181.74 | temperature | 20 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 526 | 182.00 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 603 | 182.38 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 615 | 182.46 | temperature | 20 | 4320 | < th | dose dependent | sin | 11 | NA |
| 630 | 182.58 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 634 | 182.60 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 664 | 182.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 743 | 183.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 791 | 183.59 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 954 | 184.19 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 23 |
| 967 | 184.24 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 979 | 184.28 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 980 | 184.28 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 981 | 184.28 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 6 |