Os05g0555700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0555700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.51 | 0.617 | 11 | 0.74 | 0.696 | 0.49 | 0.165 | -6.26 | 0.94 | 18.4 | 20 | 3952 | -- | -- |
| 203.08 | 0.669 | 10.8 | 2.5 | 0.643 | 0.65 | -0.0761 | -- | 1.4 | 19.5 | 13.9 | 29149 | -- | -- |
| 172.57 | 0.612 | 11 | 0.736 | 0.697 | 0.491 | -- | -6.26 | 0.94 | 18.4 | 20.02 | 3957 | -- | -- |
| 200.25 | 0.659 | 10.8 | 2.25 | 0.713 | 0.645 | -- | -- | 1.29 | 18.4 | 3.474 | 10315 | -- | -- |
| 197.72 | 0.655 | 11 | 0.661 | -- | 0.508 | -- | -6.47 | 0.915 | -- | 20.4 | 3904 | -- | -- |
| 206.99 | 0.674 | 10.7 | 2.63 | 0.704 | -- | 0.182 | -- | 1.49 | 18.5 | -- | -- | -- | -- |
| 207.06 | 0.674 | 10.7 | 2.63 | 0.705 | -- | -- | -- | 1.49 | 18.5 | -- | -- | -- | -- |
| 225.03 | 0.699 | 10.8 | 2 | -- | 0.735 | -- | -- | 1.2 | -- | 8.575 | 22268 | -- | -- |
| 228.59 | 0.704 | 10.9 | -- | 0.708 | 2.04 | -- | -- | 0.59 | 18.3 | -8.873 | 47520 | -- | -- |
| 232.93 | 0.713 | 10.7 | 2.61 | -- | -- | -- | -- | 1.48 | -- | -- | -- | -- | -- |
| 389.37 | 0.923 | 10.8 | -- | 0.672 | -- | -- | -- | 1.2 | 18.7 | -- | -- | -- | -- |
| 254.63 | 0.743 | 10.9 | -- | -- | 2.02 | -- | -- | 0.582 | -- | -9.252 | 47520 | -- | -- |
| 412.98 | 0.949 | 10.8 | -- | -- | -- | -- | -- | 1.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.21 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 161.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 3 | 162.08 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 7 |
| 5 | 162.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 43 | 164.86 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 45 | 164.88 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 48 | 165.10 | humidity | 90 | 14400 | > th | dose dependent | sin | 6 | NA |
| 51 | 165.21 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 52 | 165.23 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 55 | 165.39 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 62 | 165.48 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 76 | 165.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 89 | 166.22 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 91 | 166.23 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 116 | 166.94 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 133 | 167.37 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 149 | 167.67 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 159 | 167.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 190 | 168.48 | wind | 7 | 43200 | < th | dose independent | sin | 11 | NA |
| 192 | 168.49 | wind | 5 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 200 | 168.55 | wind | 7 | 43200 | > th | dose independent | sin | 11 | NA |
| 212 | 168.66 | wind | 5 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 225 | 168.78 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 15 |
| 230 | 168.81 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 263 | 169.05 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 265 | 169.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 266 | 169.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 272 | 169.10 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 275 | 169.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 285 | 169.20 | wind | 5 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 313 | 169.36 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 330 | 169.55 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 331 | 169.55 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 382 | 169.89 | wind | 7 | 43200 | > th | dose dependent | sin | 12 | NA |
| 393 | 169.97 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 424 | 170.16 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 437 | 170.26 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 461 | 170.42 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 572 | 170.95 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 596 | 171.11 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 658 | 171.35 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 720 | 171.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 735 | 171.67 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 736 | 171.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 775 | 171.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 15 |
| 826 | 171.95 | temperature | 25 | 4320 | < th | dose independent | rect. | 24 | 15 |
| 848 | 171.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 14 |
| 857 | 172.02 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 860 | 172.02 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 877 | 172.05 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 15 |
| 898 | 172.08 | temperature | 20 | 4320 | > th | dose dependent | sin | 21 | NA |
| 984 | 172.30 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |