Os05g0552000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0552000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 307.87 | 0.824 | 6.24 | 1.14 | 2.5 | 1.94 | 2.29 | -0.772 | 0.21 | 20.7 | 25.9 | 1536 | -- | -- |
| 308.41 | 0.818 | 6.22 | 1.37 | 2.51 | 1.87 | 2.32 | -- | 0.27 | 20.7 | 25.9 | 1536 | -- | -- |
| 325.09 | 0.84 | 6.23 | 1.13 | 2.49 | 1.92 | -- | -0.551 | 0.232 | 20.7 | 25.99 | 1536 | -- | -- |
| 325.29 | 0.84 | 6.21 | 1.29 | 2.5 | 1.88 | -- | -- | 0.284 | 20.7 | 25.9 | 1535 | -- | -- |
| 437.1 | 0.974 | 6.14 | 1.37 | -- | 2.53 | -- | -0.314 | 0.197 | -- | 26.1 | 672 | -- | -- |
| 418.46 | 0.959 | 6.08 | 2.03 | 2.56 | -- | 2.25 | -- | 0.881 | 20.8 | -- | -- | -- | -- |
| 435.26 | 0.977 | 6.08 | 1.96 | 2.56 | -- | -- | -- | 0.881 | 20.7 | -- | -- | -- | -- |
| 429.95 | 0.966 | 6.16 | 1.14 | -- | 2.79 | -- | -- | 0.104 | -- | 26 | 672 | -- | -- |
| 365.74 | 0.891 | 6.22 | -- | 2.44 | 2.18 | -- | -- | 0.085 | 20.7 | 26.01 | 1535 | -- | -- |
| 806.09 | 1.33 | 6.01 | 1.96 | -- | -- | -- | -- | 0.86 | -- | -- | -- | -- | -- |
| 536.62 | 1.08 | 6.13 | -- | 2.55 | -- | -- | -- | 0.663 | 20.8 | -- | -- | -- | -- |
| 459.42 | 0.998 | 6.21 | -- | -- | 3.03 | -- | -- | -0.00875 | -- | 26.36 | 682 | -- | -- |
| 907.02 | 1.41 | 6.06 | -- | -- | -- | -- | -- | 0.643 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 307.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 21 |
| 3 | 308.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 6 | 308.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 20 |
| 36 | 308.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 63 | 309.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 77 | 309.15 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 96 | 309.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 136 | 309.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 172 | 309.41 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 16 |
| 250 | 309.53 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 269 | 309.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 292 | 309.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 346 | 309.71 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 351 | 309.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 357 | 309.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 452 | 309.97 | temperature | 30 | 1440 | < th | dose dependent | sin | 18 | NA |
| 457 | 309.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 15 |
| 459 | 309.99 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 525 | 310.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 613 | 310.48 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 658 | 310.60 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 803 | 311.20 | temperature | 30 | 1440 | < th | dose dependent | sin | 3 | NA |
| 977 | 312.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 3 |